neXtProt - The knowledge resource on human proteins

This is a code repository for the SIB - Swiss Institute of Bioinformatics CALIPHO group neXtProt project

Controlled vocabularies

In house developed controlled vocabularies used in neXtProt.

Notes:

The Cellosaurus is in its own GitHub directory: https://github.com/calipho-sib/cellosaurus
CALOHA our tissue/organs ontology is currently not in GitHub

Name		Name	Last commit message	Last commit date
Latest commit History 92 Commits
.gitignore		.gitignore
Caloha_readme.txt		Caloha_readme.txt
HPA_Subcell_Mapping.txt		HPA_Subcell_Mapping.txt
README.md		README.md
caloha.obo		caloha.obo
cv_annotations.txt		cv_annotations.txt
cv_carbohydrate.txt		cv_carbohydrate.txt
cv_data_releases.txt		cv_data_releases.txt
cv_datasources.txt		cv_datasources.txt
cv_domain.txt		cv_domain.txt
cv_family.txt		cv_family.txt
cv_metal.txt		cv_metal.txt
cv_modification_effect.obo		cv_modification_effect.obo
cv_non_std_amino_acids.txt		cv_non_std_amino_acids.txt
cv_organelles.txt		cv_organelles.txt
cv_protein_property.obo		cv_protein_property.obo
cv_region_structures.txt		cv_region_structures.txt
cv_sequence_ontology.txt		cv_sequence_ontology.txt
cv_topological_domain.txt		cv_topological_domain.txt
developmental_stage.obo		developmental_stage.obo
icepo.obo		icepo.obo
more-dbxrefs.txt		more-dbxrefs.txt