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cv_topological_domain.txt
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cv_topological_domain.txt
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----------------------------------------------------------------------------
neXtProt
SIB - Swiss Institute of Bioinformatics and GeneBio SA
Geneva, Switzerland
----------------------------------------------------------------------------
Description: Controlled vocabulary of topological domains
File name: cv_topological_domain.txt
Last update: 15-May-2011
PRELIMINARY: DO NOT REDISTRIBUTE
----------------------------------------------------------------------------
The definition of the CV is provided in the following format:
--------- --------------------------- ----------------------
Line code Content Occurrence in an entry
--------- --------------------------- ----------------------
ID Identifier (topo domain name) Once; starts an entry
AC Accession (CVTO_xxxx) Once
DE Definition Once or more
// Terminator Once; ends an entry
AN Next free AC: CVTO_0025
__________________________________________________________________________
ID Cytoplasmic.
AC CVTO_0001
DE Cytoplasmic.
//
ID Extracellular.
AC CVTO_0002
DE Extracellular.
//
ID Exoplasmic loop.
AC CVTO_0003
DE Exoplasmic loop.
//
ID In membrane.
AC CVTO_0004
DE Extent of a region located in a membrane without crossing it.
//
ID Intragranular.
AC CVTO_0005
DE Intragranular.
//
ID Intravacuolar.
AC CVTO_0006
DE Intravacuolar.
//
ID Lumenal.
AC CVTO_0007
DE Lumenal.
//
ID Lumenal, melanosome.
AC CVTO_0008
DE Lumenal, melanosome.
//
ID Lumenal, vesicle.
AC CVTO_0010
DE Lumenal, vesicle.
//
ID Mitochondrial intermembrane.
AC CVTO_0011
DE Mitochondrial intermembrane.
//
ID Mitochondrial matrix.
AC CVTO_0013
DE Mitochondrial matrix.
//
ID Nuclear.
AC CVTO_0015
DE Nuclear.
//
ID Perinuclear space.
AC CVTO_0016
DE Perinuclear space.
//
ID Peroxisomal.
AC CVTO_0018
DE Peroxisomal.
//
ID Peroxisomal matrix.
AC CVTO_0019
DE Peroxisomal matrix.
//
ID Transmembrane region.
AC CVTO_0022
DE Extent of a membrane-spanning region.
//
ID Vacuolar.
AC CVTO_0023
DE Vacuolar.
//
ID Vesicular.
AC CVTO_0024
DE Vesicular.
//