Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

V3<> main sync #2330

Closed
wants to merge 131 commits into from
Closed

V3<> main sync #2330

Changes from all commits
Commits
Show all changes
131 commits
Select commit Hold shift + click to select a range
ea90564
Bump pypa/gh-action-pypi-publish from 1.8.10 to 1.8.11 (#1586)
dependabot[bot] Dec 4, 2023
79e80b3
Bump conda-incubator/setup-miniconda from 2.3.0 to 3.0.1 (#1587)
dependabot[bot] Dec 4, 2023
25dbeed
* Cache result of FSStore._fsspec_installed (#1581)
ph03 Dec 5, 2023
8579e21
Bump version of black in pre-commit (#1559)
dstansby Dec 7, 2023
54e31e9
Use list comprehension where applicable (#1555)
DimitriPapadopoulos Dec 7, 2023
7d2c9bf
Bump numcodecs from 0.11.0 to 0.12.1 (#1580)
dependabot[bot] Dec 7, 2023
10dee6b
Use format specification mini-language to format string (#1558)
DimitriPapadopoulos Dec 7, 2023
40a6e81
Single startswith() call instead of multiple ones (#1556)
DimitriPapadopoulos Dec 7, 2023
5954ff9
Bump pymongo from 4.5.0 to 4.6.1 (#1585)
dependabot[bot] Dec 7, 2023
6ad7b0e
Move codespell options around (#1196)
DimitriPapadopoulos Dec 7, 2023
cf32382
Bump fsspec from 2023.10.0 to 2023.12.1 (#1600)
dependabot[bot] Dec 8, 2023
4d79cfc
Add type hints to zarr.create (#1536)
dstansby Dec 8, 2023
12abd4e
Remove unused mypy ignore comments (#1602)
dstansby Dec 18, 2023
c2f5f00
Bump actions/setup-python from 4.7.1 to 5.0.0 (#1605)
dependabot[bot] Dec 20, 2023
490e0fe
Bump github/codeql-action from 2 to 3 (#1609)
dependabot[bot] Dec 20, 2023
b5f79dd
chore: update pre-commit hooks (#1448)
pre-commit-ci[bot] Dec 20, 2023
e09ee14
chore: update pre-commit hooks (#1618)
pre-commit-ci[bot] Dec 26, 2023
cd13989
Bump fsspec from 2023.12.1 to 2023.12.2 (#1606)
dependabot[bot] Dec 26, 2023
5fb420f
Bump pytest-doctestplus from 1.0.0 to 1.1.0 (#1619)
dependabot[bot] Dec 27, 2023
435a7ca
Bump pytest from 7.4.3 to 7.4.4 (#1622)
dependabot[bot] Jan 1, 2024
6961fa9
chore: update pre-commit hooks (#1626)
pre-commit-ci[bot] Jan 9, 2024
ee51835
Create TEAM.md (#1628)
jhamman Jan 10, 2024
c7d66b4
Drop python 3.8 and numpy 1.20 (#1557)
joshmoore Jan 10, 2024
6ad464b
Add Norman Rzepka to core-dev team (#1630)
jhamman Jan 10, 2024
a292dc4
chore: update pre-commit hooks (#1633)
pre-commit-ci[bot] Jan 15, 2024
68c87bb
Bump actions/download-artifact from 3 to 4 (#1611)
dependabot[bot] Jan 15, 2024
1d56da0
Update tutorial.rst to include section about accessing Zip Files on S…
jeffpeck10x Jan 16, 2024
8ac8553
doc(v3): add v3 roadmap and design document (#1583)
jhamman Jan 16, 2024
a81db07
chore: update pre-commit hooks (#1636)
pre-commit-ci[bot] Jan 22, 2024
4f2ace4
Fix zarr sync (#1663)
hoodmane Feb 14, 2024
0b0ac88
Update release.rst (#1621)
MSanKeys963 Feb 14, 2024
e50b471
Bump numpy from 1.24.3 to 1.26.1 (#1543)
dependabot[bot] Feb 14, 2024
81bbb2e
chore: update pre-commit hooks (#1642)
pre-commit-ci[bot] Feb 14, 2024
3678488
Bump ipywidgets from 8.1.0 to 8.1.1 (#1538)
dependabot[bot] Feb 14, 2024
720bea6
Proper argument for numpy.reshape (#1425)
DimitriPapadopoulos Feb 14, 2024
7449853
Bump ipywidgets from 8.1.1 to 8.1.2 (#1666)
dependabot[bot] Feb 15, 2024
3db4176
docs: ZIP-related tweaks (#1641)
d-v-b Feb 15, 2024
d23683d
Bump numpy from 1.26.1 to 1.26.4 (#1669)
dependabot[bot] Feb 16, 2024
003ff33
Change occurrences of % and format() to f-strings (#1423)
DimitriPapadopoulos Feb 16, 2024
f80f697
chore: update pre-commit hooks (#1672)
pre-commit-ci[bot] Feb 20, 2024
54bc90c
Bump pymongo from 4.6.1 to 4.6.2 (#1674)
dependabot[bot] Feb 26, 2024
70a15bb
Bump conda-incubator/setup-miniconda from 3.0.1 to 3.0.2 (#1677)
dependabot[bot] Feb 26, 2024
ec4d216
Update config.yml with Zulip
joshmoore Feb 27, 2024
a0e5559
Type dimension separator (#1620)
dstansby Feb 27, 2024
99e03c6
Replace Gitter with new Zulip Chat link (#1685)
MSanKeys963 Feb 28, 2024
67d5d82
Bump redis from 5.0.1 to 5.0.2 (#1688)
dependabot[bot] Mar 1, 2024
9c2a412
Bump pypa/gh-action-pypi-publish from 1.8.11 to 1.8.12 (#1691)
dependabot[bot] Mar 4, 2024
237f934
Bump pytest-doctestplus from 1.1.0 to 1.2.0 (#1693)
dependabot[bot] Mar 5, 2024
240bb82
Fix RTD build (#1694)
MSanKeys963 Mar 6, 2024
a1fbedb
Update release.rst for v2.17.1 (#1673)
MSanKeys963 Mar 6, 2024
d986f89
Bump pytest-timeout from 2.2.0 to 2.3.1 (#1697)
dependabot[bot] Mar 9, 2024
d642da6
Bump conda-incubator/setup-miniconda from 3.0.2 to 3.0.3 (#1690)
dependabot[bot] Mar 10, 2024
029cff7
docs(tutorial.rst): fix link to GCSMap (#1689)
DahnJ Mar 10, 2024
9fc4981
Update installation.rst stating version support policy (#1665)
MSanKeys963 Mar 10, 2024
f58065b
Bump pypa/gh-action-pypi-publish from 1.8.12 to 1.8.14 (#1700)
dependabot[bot] Mar 11, 2024
bbac254
Bump pytest-doctestplus from 1.2.0 to 1.2.1 (#1699)
dependabot[bot] Mar 13, 2024
6fe553d
Bump redis from 5.0.2 to 5.0.3 (#1698)
dependabot[bot] Mar 13, 2024
f4f0b42
Add Python 3.12 to CI (#1719)
jhamman Mar 25, 2024
04e862c
Bump pytest-cov from 4.1.0 to 5.0.0 (#1722)
dependabot[bot] Mar 25, 2024
0e58b79
chore: update pre-commit hooks (#1708)
pre-commit-ci[bot] Mar 25, 2024
8d0d910
chore: update pre-commit hooks (#1723)
pre-commit-ci[bot] Mar 25, 2024
2534413
Fix release notes (following #1719) (#1725)
jhamman Mar 27, 2024
bad8dd0
Override ipython repr methods. (#1724)
dcherian Mar 27, 2024
37e0a1a
Bump pymongo from 4.6.2 to 4.6.3 (#1729)
dependabot[bot] Mar 28, 2024
cb5b77a
Remove v1 and v2 specification (#1582)
MSanKeys963 Mar 29, 2024
97cb3a7
chore: update pre-commit hooks (#1738)
pre-commit-ci[bot] Apr 1, 2024
6ef6714
Optimize Array.info and Group.info (#1733)
dcherian Apr 2, 2024
9864b40
Bump actions/setup-python from 5.0.0 to 5.1.0 (#1736)
dependabot[bot] Apr 2, 2024
aa9a0d5
Couple fixes (#1737)
DimitriPapadopoulos Apr 2, 2024
d0fb875
Fix tests with Pytest 8 (#1714)
dstansby Apr 3, 2024
bcb7684
Avoid redundant __contains__ (#1739)
dcherian Apr 4, 2024
0cfd2be
Array & Group: Use already loaded attributes to populate cache. (#1734)
dcherian Apr 5, 2024
62910bc
Optimize attribute setting (#1741)
dcherian Apr 5, 2024
5fde3a2
Make sure fs exceptions are raised if not MissingFs exceptions (clone…
itcarroll Apr 5, 2024
1631c10
chore(release): update changelog for 2.17.2 (#1775)
jhamman Apr 5, 2024
6105ef2
chore(docs): reset release notes as unreleased (#1776)
jhamman Apr 6, 2024
5d566eb
Bump codecov/codecov-action from 3 to 4 (#1647)
dependabot[bot] Apr 22, 2024
b98f694
Update release.rst for v2.17.2 (#1778)
MSanKeys963 Apr 22, 2024
dd3dd96
Deprecate the experimental v3 implementation (#1802)
jhamman Apr 22, 2024
0a29fb3
chore: update pre-commit hooks (#1779)
pre-commit-ci[bot] Apr 22, 2024
9d046ea
Fix `is_total_slice` for size-1 dimensions (#1800)
dcherian Apr 22, 2024
60b53b0
add note to the top of the release page noting the plan for 2.18.* an…
jhamman Apr 25, 2024
f4f6e86
Bump conda-incubator/setup-miniconda from 3.0.3 to 3.0.4 (#1824)
dependabot[bot] Apr 29, 2024
29b4acc
dep(docs): deprecate experimental v3 support in docs (#1807)
jhamman Apr 30, 2024
7fa17b8
Bump h5py from 3.10.0 to 3.11.0 (#1786)
dependabot[bot] May 2, 2024
9331430
Bump redis from 5.0.3 to 5.0.4 (#1810)
dependabot[bot] May 2, 2024
2f29144
deprecate(stores): add deprecation warnings to stores that we plan to…
jhamman May 6, 2024
863c3c0
use np.inf instead of PINF/NINF (#1842)
jhamman May 7, 2024
360eb53
chore: update pre-commit hooks (#1825)
pre-commit-ci[bot] May 7, 2024
270aff1
Enable ruff/bugbear rules (B) and fix issues (#1702)
DimitriPapadopoulos May 7, 2024
056657c
Release notes for 2.18.0 (#1843)
jhamman May 7, 2024
cb4230d
Update release.rst (#1850)
jhamman May 8, 2024
8979205
Group dependabot updates (#1854)
jhamman May 13, 2024
8264ace
chore: update pre-commit hooks (#1876)
pre-commit-ci[bot] May 14, 2024
908e920
Fix a regression with scalar indexing due to #1800 (#1875)
dcherian May 16, 2024
4bd9764
release notes for 2.18.1 (#1885)
jhamman May 17, 2024
bf89533
reset release notes (#1886)
jhamman May 17, 2024
3e98c3b
Add zstd to old V3 supported codecs (#1914)
rabernat May 26, 2024
0855bd6
doc: update release notes for 2.18.2 (#1915)
jhamman May 26, 2024
a054afb
Drop support for Python 3.9
dstansby Aug 10, 2024
5437386
Revert "Drop support for Python 3.9"
dstansby Aug 10, 2024
6888c59
Update TEAM.md (#2071)
jhamman Aug 11, 2024
c72d0e2
[v2] Fix doctests with numpy 2.0 (#2073)
dstansby Aug 14, 2024
f231bb2
Fix version number in built docs (#2044)
dstansby Aug 14, 2024
11fd8db
Fix orthogonal indexing with scalar. (#1947)
dcherian Aug 14, 2024
ee43bb8
Bump the requirements group across 1 directory with 7 updates (#2092)
dependabot[bot] Aug 16, 2024
addc39d
Bump the actions group with 2 updates (#2087)
dependabot[bot] Aug 16, 2024
c5c4698
[v2] Drop support for Python 3.9 (#2074)
dstansby Aug 17, 2024
35e8106
Fix Array.__array__ for numpy 2.1 (#2106)
dstansby Aug 23, 2024
025e103
Bump test version of numcodecs (#2114)
dstansby Aug 26, 2024
d1b92b5
fix: numpy 1.24 compat for Array.__array__ (#2123)
jhamman Aug 26, 2024
2e928b1
Deprecate N5Store (#2103)
jhamman Aug 26, 2024
5bf57bd
Run tests on numpy 1.23 (#2124)
dstansby Aug 26, 2024
9e0b5e8
Bump the requirements group across 1 directory with 3 updates (#2129)
dependabot[bot] Aug 27, 2024
cc2cdee
chore: bump minimum numpy version to 1.24 (#2127)
jhamman Aug 27, 2024
cb2c669
Remove un-needed package installs in CI (#2095)
dstansby Aug 29, 2024
6656d1a
Bump the actions group with 2 updates (#2146)
dependabot[bot] Sep 2, 2024
f1978dd
Bump numpy from 2.1.0 to 2.1.1 in the requirements group (#2151)
dependabot[bot] Sep 4, 2024
88b2100
chore(docs): update release notes ahead of 2.18.4 (#2152)
jhamman Sep 5, 2024
aa9da2b
Bump pypa/gh-action-pypi-publish from 1.10.0 to 1.10.1 in the actions…
dependabot[bot] Sep 9, 2024
774f5b1
[docs] remove primary sidebar from tutorial (#2142)
sneakers-the-rat Sep 10, 2024
e1d98cd
Bump pytest from 8.3.2 to 8.3.3 in the requirements group (#2172)
dependabot[bot] Sep 11, 2024
a011079
Bump pypa/gh-action-pypi-publish in the actions group (#2220)
dependabot[bot] Sep 24, 2024
53f600b
Update TEAM.md (#2227)
jhamman Sep 24, 2024
a9abbe7
Bump the requirements group across 1 directory with 3 updates (#2284)
dependabot[bot] Oct 1, 2024
559c2e3
Bump pymongo from 4.10.0 to 4.10.1 in the requirements group (#2288)
dependabot[bot] Oct 2, 2024
6b9ab9e
Fix low contrast box titles (#2287) (#2292)
dstansby Oct 2, 2024
f175de4
Bump pypa/gh-action-pypi-publish in the actions group (#2304)
dependabot[bot] Oct 7, 2024
a1dfd01
Bump the requirements group with 2 updates (#2303)
dependabot[bot] Oct 7, 2024
eaf5d7a
Bump numcodecs from 0.13.0 to 0.13.1 in the requirements group (#2326)
dependabot[bot] Oct 10, 2024
acd6655
Merge remote-tracking branch 'upstream/main' into v3-main-sync
jhamman Oct 10, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view

These merge commits were added into this branch cleanly.

There are no new changes to show.