Merge pull request #29 from Martini-Force-Field-Initiative/Final-tran…

…sition-to-cgmartini.nl Final transition to cgmartini.nl
Martini-Force-Field-Initiative · Aug 21, 2024 · daa4de6 · daa4de6
2 parents 2f30720 + 3d56d5a
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diff --git a/docs/announcements/index.qmd b/docs/announcements/index.qmd
@@ -74,28 +74,47 @@ search: false
             color: #343a40;
             font-weight: bold;
         }
+
+        .input-container {
+            display: flex;
+            width: 100%;
+        }
     </style>
 </head>
 <body>
     <div class="banner" id="banner">
         <form onsubmit="NewSubscription(); return false;">
+            <div class="input-container" id="inputContainer">
+            <div>
             <label for="email" id="label" > Join the community to always get notified &#8594; </label>
             <input type="email" id="email" name="email" placeholder="Type your email here" required>
+            </div>
             <button type="submit">Subscribe</button>
+            </div>
         </form>
     </div>
     <script>
         function updateLabelText() {
             const label = document.getElementById('label');
             const bannerWidth = document.getElementById('banner').offsetWidth;
             const labelWidth = label.offsetWidth;
+            const inputContainer = document.getElementById('inputContainer');
             
             if (bannerWidth <= 800 && bannerWidth > 400) { // Adjust this value as needed
                 label.textContent = 'Join the community \u2192 ';
+                inputContainer.style.flexDirection = 'column';
+                inputContainer.style.alignItems = 'center';
+                inputContainer.style.gap = '15px';
             } else if (bannerWidth <= 400) {
                 label.textContent = '';
+                inputContainer.style.flexDirection = 'column';
+                inputContainer.style.alignItems = 'center';
+                inputContainer.style.gap = '15px';
             } else {
                 label.textContent = 'Join the community to always get notified \u2192 ';
+                inputContainer.style.flexDirection = 'row';
+                inputContainer.style.alignItems = 'center';
+                inputContainer.style.gap = '10px'; // Default gap value for row layout
             }
         }
 

diff --git a/docs/contact/contact.qmd b/docs/contact/contact.qmd
@@ -13,14 +13,14 @@ page-layout: full
 :::
 :::{.column width=60%}
 
-- **Team Leader:** *Prof. Dr. Siewert-Jan Marrink* ([[email protected]](mailto:[email protected]))
+- **Team Leader:** *Prof. Dr. Siewert-Jan Marrink* 
 
 - **Affiliation:** \
 [Groningen Biomolecular Sciences and Biotechnology Institute](http://www.rug.nl/research/gbb/) and <br> 
 [Zernike Institute for Advanced Materials](http://www.rug.nl/research/zernike/) <br>
 University of Groningen, The Netherlands
 
-- **Group homepage:** [https://www.rug.nl/research/molecular-dynamics/](https://www.rug.nl/research/molecular-dynamics/)
+- **Group homepage:** [[visit here]](https://www.rug.nl/research/molecular-dynamics/)
 :::
 :::{.column width=5%}
 
@@ -39,14 +39,14 @@ University of Groningen, The Netherlands
 :::
 :::{.column width=60%}
 
-- **Active member:** *Prof. Dr. Peter Tieleman* ([[email protected]](mailto:[email protected]))
+- **Active member:** *Prof. Dr. Peter Tieleman* 
 
 - **Affiliation:** \
 [Centre for Molecular Simulation](https://ucalgary.ca/molecular-simulation/home) and <br> 
 Department of Biological Sciences <br>
 University of Calgary, Canada
 
-- **Group homepage:** [https://live-ucalgary.ucalgary.ca/biocomputing/home](https://live-ucalgary.ucalgary.ca/biocomputing/home)
+- **Group homepage:** [[visit here]](https://live-ucalgary.ucalgary.ca/biocomputing/home)
 :::
 :::{.column width=5%}
 
@@ -65,13 +65,13 @@ University of Calgary, Canada
 :::
 :::{.column width=60%}
 
-- **Active member:** *Prof. Dr. Manel Nuno Melo* ([[email protected]](mailto:[email protected]))
+- **Active member:** *Prof. Dr. Manel Nuno Melo* 
 
 - **Affiliation:** \
 [ITQB NOVA](https://www.itqb.unl.pt) and [MOSTMICRO Unit](https://www.itqb.unl.pt/mostmicro) <br>
 University of Lisbon, Portugal
 
-- **Group homepage:** [https://www.itqb.unl.pt/labs/multiscale-modeling](https://www.itqb.unl.pt/labs/multiscale-modeling)
+- **Group homepage:** [[visit here]](https://www.itqb.unl.pt/labs/multiscale-modeling)
 :::
 :::{.column width=5%}
 
@@ -90,7 +90,7 @@ University of Lisbon, Portugal
 :::
 :::{.column width=60%}
 
-- **Active member:** *Prof. Dr. Paulo Cesar Tellez de Souza* ([[email protected]](mailto:[email protected]))
+- **Active member:** *Prof. Dr. Paulo Cesar Tellez de Souza* 
 
 - **Affiliation:** \
 [Laboratory of Biology and Modelling of the Cell](https://www.ens-lyon.fr/LBMC) and [CBPsmn](https://www.ens-lyon.fr/PSMN/doku.php?id=accueil) <br>
@@ -115,13 +115,13 @@ Ecole Normale Supérieure de Lyon, France
 :::
 :::{.column width=60%}
 
-- **Active member:** *Prof. Dr. Luca Monticelli* ([[email protected]](mailto:[email protected]))
+- **Active member:** *Prof. Dr. Luca Monticelli* 
 
 - **Affiliation:** \
 [National Centre for Scientific Research](https://www.cnrs.fr/en) <br>
 University of Lyon, France
 
-- **Group homepage:** [https://mmsb.cnrs.fr/en/team/mobi-en/](https://mmsb.cnrs.fr/en/team/mobi-en/)
+- **Group homepage:** [[visit here]](https://mmsb.cnrs.fr/en/team/mobi-en/)
 :::
 :::{.column width=5%}
 
@@ -140,7 +140,7 @@ University of Lyon, France
 :::
 :::{.column width=60%}
 
-- **Active member:** *Dr. Helgi Ingolfur Ingolfsson* ([[email protected]](mailto:[email protected]))
+- **Active member:** *Dr. Helgi Ingolfur Ingolfsson* 
 
 - **Affiliation:** \
 [Biochemical and Biophysical Systems Group](https://bbs.llnl.gov) and <br> [Lawrence Livermore National Laboratory](https://www.llnl.gov) <br>
@@ -165,13 +165,13 @@ California, United States
 :::
 :::{.column width=60%}
 
-- **Active member:** *Dr. Sebastian Thallmair* ([[email protected]](mailto:[email protected]))
+- **Active member:** *Dr. Sebastian Thallmair* 
 
 - **Affiliation:** \
 [Frankfurt Institute for Advanced Studies](https://fias.institute/en/) <br>
 Frankfurt, Germany
 
-- **Group homepage:** [https://www.fias.science/en/life-and-neurosciences/research-groups/sebastian-thallmair/](https://www.fias.science/en/life-and-neurosciences/research-groups/sebastian-thallmair/)
+- **Group homepage:** [[visit here]](https://www.fias.science/en/life-and-neurosciences/research-groups/sebastian-thallmair/)
 :::
 :::{.column width=5%}
 
@@ -190,13 +190,13 @@ Frankfurt, Germany
 :::
 :::{.column width=60%}
 
-- **Active member:** *Dr. Riccardo Alessandri* ([[email protected]](mailto:[email protected]))
+- **Active member:** *Dr. Riccardo Alessandri* 
 
 - **Affiliation:** \
 NWO Rubicon Fellow <br>
 University of Chicago, United States
 
-- **Personal homepage:** [https://ricalessandri.github.io](https://ricalessandri.github.io)
+- **Personal homepage:** [[visit here]](https://ricalessandri.github.io)
 :::
 :::{.column width=5%}
 
@@ -215,7 +215,7 @@ University of Chicago, United States
 :::
 :::{.column width=60%}
 
-- **Active member:** *Dr. Fabian Grunewald* ([[email protected]](mailto:[email protected]))
+- **Active member:** *Dr. Fabian Grunewald* 
 
 - **Affiliation:** \
 Independent PostDoc Fellow <br>
@@ -337,11 +337,11 @@ function submitForm() {
 
 <div class="form-container">
   <form onsubmit="submitForm(); return false;">
-    <label class="form-label" for="name">Name:</label><br>
+    <label class="form-label" for="name">Your Name:</label><br>
     <input class="form-input" type="text" id="name" name="name" required><br>
-    <label class="form-label" for="email">Email:</label><br>
+    <label class="form-label" for="email">Email Address:</label><br>
     <input class="form-input" type="email" id="email" name="email" required><br>
-    <label class="form-label" for="institution">Institution:</label><br>
+    <label class="form-label" for="institution">Current Institution:</label><br>
     <input class="form-input" type="text" id="institution" name="institution" required><br>
     <label class="form-label" for="subject">Subject:</label><br>
     <input class="form-input" type="text" id="subject" name="subject" required><br>

diff --git a/docs/contact/lmonticelli.jpg b/docs/contact/lmonticelli.jpg
diff --git a/docs/downloads/force-field-parameters/martini3/lipidome.qmd b/docs/downloads/force-field-parameters/martini3/lipidome.qmd
@@ -13,5 +13,6 @@ Martini 3 lipid parameters are listed below according to their major categories.
 
 - [martini_v3.0.0_phospholipids_v1.itp](https://cgmartini-library.s3.ca-central-1.amazonaws.com/1_Downloads/ff_parameters/martini3/martini_v3.0.0_phospholipids_v1.itp) | (original release)
 
-> **Optimized Martini 3 lipidome will soon be announced!!**
-<hr>
+<hr>
+
+> **Note:** An optimized Martini 3 lipidome is currently under development. Please check back soon for updates.
diff --git a/docs/downloads/force-field-parameters/martini3/nucleic_acids.qmd b/docs/downloads/force-field-parameters/martini3/nucleic_acids.qmd
@@ -12,4 +12,6 @@ Martini 3 parameters for all nucleobases in deoxyribonucleic acid (DNA) and ribo
 
 - [martini_v3.0.0_nucleobases_v1.itp](https://cgmartini-library.s3.ca-central-1.amazonaws.com/1_Downloads/ff_parameters/martini3/martini_v3.0.0_nucleobases_v1.itp) | (original release)
 
-<hr>
+<hr>
+
+> **Note:** An optimized version of the Martini 3 parameters for nucleic acids is currently under development. Please check back soon for updates.