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44 Open 152 Closed
44 Open 152 Closed
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Issues list

ImportError in CellPhoneDB - Cannot Import main
#207 opened Nov 18, 2024 by ArzooShamoon
1
MemoryError: Unable to allocate 163. GiB for an array with shape (1092172, 20002) and data type float64
#206 opened Oct 16, 2024 by wuxiangning
3
More interactions if more cells - built in correction?
#203 opened Oct 9, 2024 by michaelmather15
1
Problems with microenvironment file
#202 opened Aug 11, 2024 by Jessica1525809
Whether single cell data of different cell components are suitable for analysis after integration
#199 opened Jul 2, 2024 by Dolphin-dfy
1
Enhanced CellPhoneDB Visualization in Python
#198 opened Jun 27, 2024 by Starlitnightly
Metafile_error if unique cells = unique cell_types
#197 opened Jun 27, 2024 by Leonhard2000
Gene name duplications
#196 opened Jun 24, 2024 by Leonhard2000
No CellphoneDB interactions found in this input
#195 opened Jun 14, 2024 by fafa92
3
Means for reciprocal cell type comparisons are different
#194 opened Jun 11, 2024 by manf1984
2
Cellphonedb for proteomics analysis
#193 opened Jun 10, 2024 by harshagr21
2
negative values of lr-means column
#192 opened Jun 3, 2024 by ngvananh2508
2
Should all genes be inputted, or only just the genes related to interactions?
#191 opened May 24, 2024 by bitcometz
1
KeyError when scoring interactions in CellPhoneDB
#190 opened May 23, 2024 by GUOYF0412
8
About integrin genes from the output
#188 opened May 16, 2024 by Pedramto89
10
Directionality of interactions
#187 opened May 15, 2024 by Pedramto89
2
Exception: Some clusters/cell_types in microenvironments file are not present in metadata
#184 opened Apr 25, 2024 by Jessica1525809
3
interacting_pair is ligand_receptor or receptor_ligand?
#181 opened Apr 9, 2024 by yanwuanxin
5
How to handle the different cells of interest analysis
#178 opened Mar 26, 2024 by Pedramto89
1
KeyError: 'significant_means'
#177 opened Mar 24, 2024 by dhairya02
2
Surface proteins
#175 opened Feb 22, 2024 by Pedramto89
1
How to download database?
#172 opened Feb 12, 2024 by ryao-mdanderson
6
All counts filtered
#171 opened Feb 8, 2024 by sierranishizaki
3
KeyError
#170 opened Feb 5, 2024 by Inbarpl
1
CellSign results have lost interaction orientation
#169 opened Jan 23, 2024 by rchapple2
1
ProTip! Adding no:label will show everything without a label.