Optional Dependencies #860
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # Tethys Main CI | |
| name: Tethys-CI | |
| # Run on pushes and pull requests but not tags. | |
| on: | |
| push: | |
| branches: | |
| - "main" | |
| - "release*" | |
| pull_request: | |
| branches: | |
| - "*" | |
| schedule: | |
| - cron: "0 0 * * 0" # weekly | |
| env: | |
| CONDA_BUILD_PIN_LEVEL: minor | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| TEST_IMAGE: tethys:dev | |
| POSTGRES_DB: tethys_postgis | |
| POSTGRES_PASSWORD: please_dont_use_default_passwords | |
| POSTGRES_PORT: 5432 | |
| TETHYS_DB_HOST: 172.17.0.1 | |
| TETHYS_DB_PORT: 5432 | |
| TETHYS_DB_USERNAME: tethys_default | |
| TETHYS_DB_PASSWORD: please_dont_use_default_passwords | |
| TETHYS_DB_SUPERUSER: tethys_super | |
| TETHYS_DB_SUPERUSER_PASS: please_dont_use_default_passwords | |
| jobs: | |
| lint: | |
| name: Lint with Flake8 | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout Source | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Install Flake8 | |
| run: pip install flake8 | |
| - name: Run Flake8 | |
| run: flake8 $GITHUB_WORKSPACE | |
| format: | |
| name: Check Black Formatting | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: psf/black@stable | |
| tests: | |
| name: Tests (${{ matrix.platform }}) | |
| runs-on: ${{ matrix.platform }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: [ubuntu-latest, macos-latest] | |
| python-version: [3.7] | |
| steps: | |
| # Checkout the source | |
| - name: Checkout Source | |
| uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 0 | |
| # Install Tethys | |
| - name: Install Tethys | |
| run: | | |
| cd .. | |
| bash ./tethys/scripts/install_tethys.sh -h | |
| bash ./tethys/scripts/install_tethys.sh --partial-tethys-install meds -n tethys -s $PWD/tethys | |
| # Setup Tethys and Conda | |
| - name: Setup Tethys and Conda | |
| run: | | |
| . ~/miniconda/etc/profile.d/conda.sh | |
| conda activate tethys | |
| conda list | |
| tethys db start | |
| pip install coveralls | |
| # Test Tethys | |
| - name: Test Tethys | |
| run: | | |
| . ~/miniconda/etc/profile.d/conda.sh | |
| conda activate tethys | |
| tethys test -c -u -v 2 | |
| # Generate Coverage Report | |
| - name: Generate Coverage Report | |
| if: matrix.platform == 'ubuntu-latest' | |
| run: | | |
| . ~/miniconda/etc/profile.d/conda.sh | |
| conda activate tethys | |
| coveralls --service=github | |
| docker-build: | |
| name: Docker Build | |
| runs-on: ${{ matrix.platform }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: [ubuntu-latest] | |
| python-version: [3.7] | |
| steps: | |
| # Checkout the source | |
| - name: Checkout Source | |
| uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 0 | |
| # Build the docker for no tag | |
| - name: Build Without Tag | |
| run: | | |
| docker build -t ${{ secrets.DOCKER_UPLOAD_URL }}:dev .; | |
| docker tag ${{ secrets.DOCKER_UPLOAD_URL }}:dev ${{ env.TEST_IMAGE }}; | |
| # Upload docker if pull request no tag | |
| - name: Upload Docker No Tag | |
| if: ${{ github.event_name != 'pull_request' }} | |
| run: | | |
| echo "Pushing to docker registry"; | |
| echo "${{ secrets.DOCKER_PASSWORD }}" | docker login -u "${{ secrets.DOCKER_USERNAME }}" --password-stdin; | |
| docker push ${{ secrets.DOCKER_UPLOAD_URL }}:dev; | |
| # No Upload if Pull Request | |
| - name: No Upload | |
| if: ${{ github.event_name == 'pull_request' }} | |
| run: | | |
| echo "Uploading is skipped for pull requests." | |
| # Save image as artifact for startup test job | |
| - name: Upload Docker Artifact | |
| uses: ishworkh/docker-image-artifact-upload@v1 | |
| with: | |
| image: ${{ env.TEST_IMAGE }} | |
| retention_days: "1" | |
| startup_test: | |
| name: Docker Start-up Test | |
| needs: [docker-build] | |
| runs-on: ubuntu-latest | |
| services: | |
| tethys-postgis: | |
| image: postgis/postgis:14-3.3 | |
| env: | |
| POSTGRES_HOST: tethys-postgis | |
| POSTGRES_PASSWORD: please_dont_use_default_passwords | |
| POSTGRES_DB: tethys_postgis | |
| POSTGRES_PORT: 5432 | |
| options: >- | |
| --health-cmd pg_isready | |
| --health-interval 10s | |
| --health-timeout 5s | |
| --health-retries 10 | |
| ports: | |
| - 5432:5432 | |
| steps: | |
| - name: Download Docker Artifact | |
| uses: ishworkh/docker-image-artifact-download@v1 | |
| with: | |
| image: ${{ env.TEST_IMAGE }} | |
| - name: Run Salt Test | |
| run: | | |
| docker run --rm \ | |
| -e POSTGRES_DB=${{ env.POSTGRES_DB }} \ | |
| -e POSTGRES_PASSWORD=${{ env.POSTGRES_PASSWORD }} \ | |
| -e POSTGRES_PORT=${{ env.POSTGRES_PORT }} \ | |
| -e TETHYS_DB_HOST='${{ env.TETHYS_DB_HOST }}' \ | |
| -e TETHYS_DB_PORT=${{ env.TETHYS_DB_PORT }} \ | |
| -e TETHYS_DB_USERNAME=${{ env.TETHYS_DB_USERNAME }} \ | |
| -e TETHYS_DB_PASSWORD=${{ env.TETHYS_DB_PASSWORD }} \ | |
| -e TETHYS_DB_SUPERUSER=${{ env.TETHYS_DB_SUPERUSER }} \ | |
| -e TETHYS_DB_SUPERUSER_PASS=${{ env.TETHYS_DB_SUPERUSER_PASS }} \ | |
| ${{ env.TEST_IMAGE }} \ | |
| /bin/bash -c "cd /usr/lib/tethys && source ./run.sh --test" | |
| conda-build: | |
| name: Conda Build | |
| runs-on: ${{ matrix.platform }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: [ubuntu-latest] | |
| python-version: [3.7] | |
| steps: | |
| # Checkout the source | |
| - name: Checkout Source | |
| uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 0 | |
| # Setup Tethys | |
| - name: Setup Tethys | |
| run: | | |
| cd .. | |
| bash ./tethys/scripts/install_tethys.sh --partial-tethys-install me -n tethys -s $PWD/tethys | |
| . ~/miniconda/etc/profile.d/conda.sh | |
| conda activate tethys | |
| hash -r | |
| conda config --set always_yes yes --set changeps1 no | |
| conda update -q conda | |
| # Export Conda Build Path | |
| - name: Set Conda Build Path | |
| uses: allenevans/[email protected] | |
| with: | |
| CONDA_BLD_PATH: "/home/runner/conda-bld" | |
| # Generate Conda Recipe Without Constrained Dependencies | |
| - name: Generate Conda Recipe | |
| run: | | |
| cd .. | |
| . ~/miniconda/etc/profile.d/conda.sh; | |
| conda activate tethys; | |
| tethys gen metayaml --overwrite; | |
| # Show Tethys Meta | |
| - name: Show Tethys Meta | |
| run: | | |
| cd .. | |
| cat ./tethys/conda.recipe/meta.yaml | |
| # Build Conda | |
| - name: Build Conda | |
| run: | | |
| cd .. | |
| . ~/miniconda/etc/profile.d/conda.sh; | |
| conda create -y -c conda-forge -n conda-build conda-build anaconda-client | |
| conda activate conda-build | |
| conda config --set anaconda_upload no | |
| mkdir -p ~/conda-bld | |
| conda-build -c tethysplatform -c conda-forge ./tethys/conda.recipe | |
| # Upload Conda No Pull Request No Tag | |
| - name: Upload Conda No Tag | |
| if: ${{ github.event_name != 'pull_request' }} | |
| run: | | |
| cd .. | |
| . ~/miniconda/etc/profile.d/conda.sh; | |
| ls ~/conda-bld/noarch | |
| conda activate conda-build | |
| anaconda -t "${{ secrets.CONDA_UPLOAD_TOKEN }}" upload -u ${{ secrets.CONDA_UPLOAD_USER }} -l dev $CONDA_BLD_PATH/noarch/tethys-platform*.tar.bz2 --force; | |
| # No Upload if Pull Request | |
| - name: No Upload | |
| if: ${{ github.event_name == 'pull_request' }} | |
| run: | | |
| echo "Uploading is skipped for pull requests." |