*fa: raw sequence file, fasta format
*cut.fas: alignment file after manual trim
*.fas: alignment by Muscle
*nwk or *fasttree: Phylogenetic Tree Original file
*eps: EPS format picture, can be viewed or edited with Adobe Illustrator
evalue.xlsx: Usually store evalue information, which can be viewed or edited with Microsoft Excel
rename.txt: The correspondence between sequence names in alignment files and sequence names in phylogenetic tree files