Skip to content

update GHA, repo info #1

update GHA, repo info

update GHA, repo info #1

name: python-tiledbsoma-ml CI
on:
pull_request:
branches: ["*"]
push:
branches: [main]
workflow_dispatch:
jobs:
lint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: "3.11"
- name: Restore pre-commit cache
uses: actions/cache@v4
with:
path: ~/.cache/pre-commit
key: pre-commit-${{ hashFiles('.pre-commit-config.yaml') }}
- name: Install pre-commit
run: pip -v install pre-commit
- name: Run pre-commit hooks on all files
run: pre-commit run -v -a
tests:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.9", "3.10", "3.11", "3.12"]
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
cache: pip
- name: Install prereqs
run: |
pip install --upgrade pip wheel pytest pytest-cov setuptools
pip install .
- name: Run tests
run: pytest -v --cov=src --cov-report=xml tests
build:
# for now, just do a test build to ensure that it works
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: "3.11"
- name: Do build
run: |
pip install --upgrade build pip wheel setuptools setuptools-scm
python -m build .