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readme update
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sergpolly committed Sep 12, 2016
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# HaploLimit
Alleles and linkage information to estimate range of compatible haplotypes


This is the minimal working example with the initial example from Nick sent in 2015.
'./bin/testhaplo' simply gives bounds for all compatible haplotypes, and is being launched many times by the 'haploscanner.py' master script.

Master script calculates haplo-boundaries for the original input data and then moves on the scanning procedure: fix haplotype frequency within the determined complatible range and recaluclate other boundaries accordingly.




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