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Attempt to build container #144

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Attempt to build container

Attempt to build container #144

Workflow file for this run

.github/workflows/build.yml at 50f21a8
name: CI
on:
push:
branches: [ "master" ]
pull_request:
branches: [ "master" ]
workflow_dispatch:
jobs:
linux:
strategy:
matrix:
include:
- py-version: '3.10'
c-compiler: 'gcc'
cxx-compiler: 'g++'
- py-version: '3.11'
c-compiler: 'gcc'
cxx-compiler: 'g++'
- py-version: '3.10'
c-compiler: 'clang'
cxx-compiler: 'clang++'
fail-fast: false
name: Linux ${{ matrix.c-compiler}} Python ${{ matrix.py-version }}
runs-on: ubuntu-latest
timeout-minutes: 180
env:
MPIEXEC_FLAGS: "--allow-run-as-root --oversubscribe"
PYNUCLEUS_BUILD_PARALLELISM: 2
OMPI_CC: ${{ matrix.c-compiler }}
OMPI_CXX: ${{ matrix.cxx-compiler }}
steps:
- name: Check out repo
if: always()
uses: actions/checkout@v3
- name: Pull ccache cache
if: always()
id: ccache-restore
uses: actions/cache/restore@v3
with:
path: /home/runner/.cache/ccache
key: ccache-${{ runner.os }}-${{ matrix.c-compiler }}-${{ matrix.py-version }}
- uses: actions/setup-python@v4
if: always()
with:
python-version: ${{ matrix.py-version }}
- name: Install Ubuntu packages
if: always()
run: |
sudo apt-get update
sudo apt-get install mpi-default-bin mpi-default-dev libmetis-dev libparmetis-dev libsuitesparse-dev ccache
- name: Get ccache config dir
if: always()
run: ccache --show-config
- name: Install Python dependencies
if: always()
run: make prereq && make prereq-extra
- name: Install
if: always()
run: python -m pip install wheel && python -m pip list && make install PIP_INSTALL_FLAGS="--no-use-pep517 -vvv"
- name: Remove ccache cache
if: ${{ steps.ccache-restore.outputs.cache-hit }}
shell: bash
env:
GH_TOKEN: ${{ github.token }}
run: |
gh extension install actions/gh-actions-cache
gh actions-cache delete ccache-${{ runner.os }}-${{ matrix.c-compiler}}-${{ matrix.py-version }} --confirm
continue-on-error: true
- name: Push ccache cache
if: always()
uses: actions/cache/save@v3
with:
path: /home/runner/.cache/ccache
key: ccache-${{ runner.os }}-${{ matrix.c-compiler }}-${{ matrix.py-version }}
- name: Ccache report
if: always()
run: ccache -s
- name: Run tests
if: always()
run: python3 -m pytest --junit-xml=test-results-${{ runner.os }}-${{ matrix.c-compiler }}-${{ matrix.py-version }}.xml tests/
- name: Run flake8
if: always()
run: |
make flake8
mv flake8.xml flake8-${{ runner.os }}-${{ matrix.c-compiler }}-${{ matrix.py-version }}.xml
- name: Archive test results
uses: actions/upload-artifact@v3
if: always()
with:
name: Test results
path: test-results-${{ runner.os }}-${{ matrix.c-compiler }}-${{ matrix.py-version }}.xml
- name: Report test results
uses: dorny/test-reporter@v1
if: always()
with:
name: Test report (${{ runner.os }}, ${{ matrix.c-compiler }}, Python ${{ matrix.py-version }})
path: test-results-${{ runner.os }}-${{ matrix.c-compiler }}-${{ matrix.py-version }}.xml
reporter: java-junit
fail-on-error: true
- name: Report flake8 results
uses: dorny/test-reporter@v1
if: always()
with:
name: Flake8 report (${{ runner.os }}, ${{ matrix.c-compiler }}, Python ${{ matrix.py-version }})
path: flake8-${{ runner.os }}-${{ matrix.c-compiler }}-${{ matrix.py-version }}.xml
reporter: java-junit
fail-on-error: false
mac:
strategy:
matrix:
py-version: ['3.10']
fail-fast: false
name: Mac clang Python ${{ matrix.py-version }}
runs-on: macos-latest
timeout-minutes: 180
env:
MPIEXEC_FLAGS: "--allow-run-as-root --oversubscribe"
PYNUCLEUS_BUILD_PARALLELISM: 3
SUITESPARSE_INCLUDE_DIR: /usr/local/Cellar/brewsci-suite-sparse/4.5.5_2/include
SUITESPARSE_LIBRARY_DIR: /usr/local/Cellar/brewsci-suite-sparse/4.5.5_2/lib
LDFLAGS: -L/usr/local/opt/brewsci-metis/lib -L/usr/local/opt/brewsci-parmetis/lib
CPPFLAGS: -I/usr/local/opt/brewsci-metis/include -I/usr/local/opt/brewsci-parmetis/include
steps:
- name: Check out repo
uses: actions/checkout@v3
- name: Pull ccache cache
if: always()
id: ccache-restore
uses: actions/cache/restore@v3
with:
path: /Users/runner/Library/Caches/ccache
key: ccache-${{ runner.os }}-${{ matrix.py-version }}
- name: Setup GNU Fortran
uses: modflowpy/install-gfortran-action@v1
- uses: actions/setup-python@v4
with:
python-version: ${{ matrix.py-version }}
- name: Install packages
run: |
brew install open-mpi ccache
brew tap brewsci/num
brew install brewsci-metis brewsci-parmetis brewsci-suite-sparse
- name: Get ccache config dir
if: always()
run: ccache --show-config
- name: Install Python dependencies
run: make prereq && make prereq-extra
- name: Install
run: PIP_INSTALL_FLAGS=-vvv make install
- name: Remove ccache cache
if: ${{ steps.ccache-restore.outputs.cache-hit }}
shell: bash
env:
GH_TOKEN: ${{ github.token }}
run: |
gh extension install actions/gh-actions-cache
gh actions-cache delete ccache-${{ runner.os }}-${{ matrix.py-version }} --confirm
continue-on-error: true
- name: Push ccache cache
if: always()
uses: actions/cache/save@v3
with:
path: /Users/runner/Library/Caches/ccache
key: ccache-${{ runner.os }}-${{ matrix.py-version }}
- name: Ccache report
if: always()
run: ccache -s
- name: Run tests
if: always()
run: python3 -m pytest --junit-xml=test-results-${{ runner.os }}-${{ matrix.py-version }}.xml tests/
- name: Archive test results
uses: actions/upload-artifact@v3
if: always()
with:
name: Test results
path: test-results-${{ runner.os }}-${{ matrix.py-version }}.xml
- name: Report test results
uses: dorny/test-reporter@v1
if: always()
with:
name: Test report (${{ runner.os }}, Python ${{ matrix.py-version }})
path: test-results-${{ runner.os }}-${{ matrix.py-version }}.xml
reporter: java-junit
fail-on-error: true