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SamUtils PairOrientation is confusingly ambiguous about paired reads needing to map to the same contig Build and Test #389: Pull request #1709 synchronize by yfarjoun
November 30, 2024 03:08 19m 13s yf_add_documentation_and_assert_orientatin
yf_add_documentation_and_assert_orientatin
November 30, 2024 03:08 19m 13s
Chore: Update README.md Build and Test #388: Pull request #1731 opened by ArtoriaZhang
November 28, 2024 09:44 Action required ArtoriaZhang:patch-1
ArtoriaZhang:patch-1
November 28, 2024 09:44 Action required
Implementation of CRAM 3.1 codecs. Build and Test #387: Pull request #1714 synchronize by cmnbroad
November 25, 2024 20:28 18m 47s cn_cram_3_1_codecs
cn_cram_3_1_codecs
November 25, 2024 20:28 18m 47s
Implementation of CRAM 3.1 codecs. Build and Test #386: Pull request #1714 synchronize by cmnbroad
November 25, 2024 19:55 18m 36s cn_cram_3_1_codecs
cn_cram_3_1_codecs
November 25, 2024 19:55 18m 36s
Experiment with heap space issues. Build and Test #385: Pull request #1729 synchronize by cmnbroad
November 25, 2024 15:17 18m 7s cn_cram_heap_space
cn_cram_heap_space
November 25, 2024 15:17 18m 7s
Experiment with heap space issues. Build and Test #384: Pull request #1729 synchronize by cmnbroad
November 25, 2024 14:31 19m 7s cn_cram_heap_space
cn_cram_heap_space
November 25, 2024 14:31 19m 7s
Experiment with heap space issues. Build and Test #383: Pull request #1729 synchronize by cmnbroad
November 19, 2024 21:43 18m 44s cn_cram_heap_space
cn_cram_heap_space
November 19, 2024 21:43 18m 44s
Experiment with heap space issues. Build and Test #382: Pull request #1729 opened by cmnbroad
November 19, 2024 21:07 18m 16s cn_cram_heap_space
cn_cram_heap_space
November 19, 2024 21:07 18m 16s
Implementation of CRAM 3.1 codecs. Build and Test #381: Pull request #1714 synchronize by cmnbroad
November 19, 2024 16:32 18m 7s cn_cram_3_1_codecs
cn_cram_3_1_codecs
November 19, 2024 16:32 18m 7s
Implementation of CRAM 3.1 codecs. Build and Test #380: Pull request #1714 synchronize by cmnbroad
November 19, 2024 16:14 18m 0s cn_cram_3_1_codecs
cn_cram_3_1_codecs
November 19, 2024 16:14 18m 0s
Implementation of CRAM 3.1 codecs. Build and Test #379: Pull request #1714 synchronize by cmnbroad
November 18, 2024 21:42 19m 12s cn_cram_3_1_codecs
cn_cram_3_1_codecs
November 18, 2024 21:42 19m 12s
Implementation of CRAM 3.1 codecs. Build and Test #378: Pull request #1714 synchronize by cmnbroad
November 18, 2024 21:19 19m 47s cn_cram_3_1_codecs
cn_cram_3_1_codecs
November 18, 2024 21:19 19m 47s
Implementation of CRAM 3.1 codecs. Build and Test #377: Pull request #1714 synchronize by cmnbroad
November 13, 2024 23:30 18m 57s cn_cram_3_1_codecs
cn_cram_3_1_codecs
November 13, 2024 23:30 18m 57s
Implementation of CRAM 3.1 codecs. Build and Test #376: Pull request #1714 synchronize by cmnbroad
November 13, 2024 21:42 18m 30s cn_cram_3_1_codecs
cn_cram_3_1_codecs
November 13, 2024 21:42 18m 30s
Improve GFF API by adding new convenience methods Build and Test #375: Commit dbebac3 pushed by lbergelson
October 29, 2024 16:27 20m 23s master
master
October 29, 2024 16:27 20m 23s
Treat .vcf.bgz as a valid vcf extension in FileExtension (#1727) Build and Test #374: Commit 4ea3285 pushed by lbergelson
October 29, 2024 16:23 18m 56s master
master
October 29, 2024 16:23 18m 56s
improve gff: add Locatable to Gff3BaseData, add 'Optional<String> getAttr(key)' and 'hasAttribute' Build and Test #373: Pull request #1726 synchronize by lindenb
October 29, 2024 15:47 19m 43s lindenb:pl_gtf_att
lindenb:pl_gtf_att
October 29, 2024 15:47 19m 43s
improve gff: add Locatable to Gff3BaseData, add 'Optional<String> getAttr(key)' and 'hasAttribute' Build and Test #372: Pull request #1726 synchronize by lindenb
October 29, 2024 15:03 19m 8s lindenb:pl_gtf_att
lindenb:pl_gtf_att
October 29, 2024 15:03 19m 8s
.vcf.bgz as a valid vcf extension in FileExtensions Build and Test #371: Pull request #1727 synchronize by lindenb
October 29, 2024 13:38 19m 4s lindenb:pl_vcfconstants
lindenb:pl_vcfconstants
October 29, 2024 13:38 19m 4s
.vcf.bgz as a valid vcf extension in FileExtensions Build and Test #370: Pull request #1727 opened by lindenb
October 29, 2024 12:58 18m 58s lindenb:pl_vcfconstants
lindenb:pl_vcfconstants
October 29, 2024 12:58 18m 58s
improve gff: add Locatable to Gff3BaseData, add 'Optional<String> getAttr(key)' and 'hasAttribute' Build and Test #369: Pull request #1726 opened by lindenb
October 29, 2024 11:12 19m 45s lindenb:pl_gtf_att
lindenb:pl_gtf_att
October 29, 2024 11:12 19m 45s
Add ReferenceSequenceFile.getSubsequenceAt(final Locatable locatable … Build and Test #368: Commit fd56496 pushed by lbergelson
October 28, 2024 20:56 20m 17s master
master
October 28, 2024 20:56 20m 17s
add ReferenceSequenceFile.getSubsequenceAt(final Locatable locatable ) shortcut to getSubsequenceAt(loc.getContig(), loc.getStart(), loc.getEnd()) Build and Test #367: Pull request #1725 opened by lindenb
October 28, 2024 13:31 20m 55s lindenb:pl_reference_locatable
lindenb:pl_reference_locatable
October 28, 2024 13:31 20m 55s
Adding additional java versions to our test matrix and toolchains Build and Test #366: Pull request #1723 opened by lbergelson
October 11, 2024 16:07 46s lb_add_new_versions_to_tests
lb_add_new_versions_to_tests
October 11, 2024 16:07 46s
Carrot setup Build and Test #365: Pull request #1721 synchronize by lbergelson
October 8, 2024 21:51 19m 47s lb_carrot
lb_carrot
October 8, 2024 21:51 19m 47s