Detrend fluorescence microscopy image series for fluorescence fluctuation and correlation spectroscopy (FCS and FFS) analysis. This package contains functionality published in a 2016 paper https://doi.org/10.1093/bioinformatics/btx434 but it has been extended since then with the Robin Hood algorithm and thus contains unpublished work.
You can install the release version of detrendr from
CRAN with:
install.packages("detrendr")You can install the (unstable) development version of detrendr from
GitHub with:
devtools::install_github("rorynolan/detrendr")I highly recommend using the release version. The dev version is just for the ultra-curious and should be thought of as unreliable.
See the package website at https://rorynolan.github.io/detrendr/.
Contributions to this package are welcome. The preferred method of contribution is through a github pull request. Feel free to contact me by creating an issue. Please note that this project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.