Multiclass segmentation outputs supported, added user preferences opt… #118
Workflow file for this run
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| name: Build Ubuntu | |
| on: | |
| push: | |
| branches: | |
| - '*' | |
| pull_request: | |
| branches: | |
| - '*' | |
| workflow_dispatch: | |
| jobs: | |
| build: | |
| name: Build packages | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python 3.7 | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.7" | |
| - name: Install CL dependencies | |
| run: | | |
| apt update && apt install -y sudo | |
| sudo apt install -y clinfo | |
| - name: Setup OpenCL | |
| run: | | |
| sudo add-apt-repository ppa:ocl-icd/ppa | |
| sudo apt update | |
| sudo apt-get install -y pocl-opencl-icd | |
| - name: Setup OpenGL | |
| run: sudo apt-get install -y libopengl0 | |
| - name: Debug clinfo | |
| run: clinfo | |
| - name: Free Up GitHub Actions Ubuntu Runner Disk Space | |
| uses: dbouget/free-disk-space@main | |
| with: | |
| # This might remove tools that are actually needed, if set to "true" but frees about 6 GB | |
| tool-cache: false | |
| # All of these default to true, but feel free to set to "false" if necessary for your workflow | |
| android: true | |
| dotnet: true | |
| haskell: true | |
| large-packages: true | |
| swap-storage: true | |
| - name: Download ANTs | |
| uses: robinraju/release-downloader@main | |
| with: | |
| repository: "raidionics/Raidionics-dependencies" | |
| latest: true | |
| fileName: "ANTsX-v2.4.3_ubuntu.tar.gz" | |
| out-file-path: "downloads" | |
| - name: Extract ANTs | |
| run: | | |
| cd ${{github.workspace}}/downloads/ | |
| tar -xzf ANTsX-v2.4.3_ubuntu.tar.gz -C ${{github.workspace}}/downloads/ | |
| mkdir ${{github.workspace}}/ANTs | |
| mkdir ${{github.workspace}}/ANTs/install | |
| # mv ${{github.workspace}}/downloads/install ${{github.workspace}}/ANTs/ | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install git+https://github.com/dbouget/raidionics_rads_lib.git@software | |
| pip install -r assets/requirements.txt | |
| pip uninstall -y PySide6 PySide6-Addons PySide6-Essentials | |
| pip install --force-reinstall --no-cache-dir pyside6==6.2.4 | |
| - name: Build software | |
| run: | | |
| pip install pyinstaller==5.13.2 | |
| mkdir tmp_dependencies | |
| pyinstaller --log-level INFO --noconfirm --clean assets/main.spec | |
| # - name: Test executable | |
| # run: QT_QPA_PLATFORM="offscreen" ./dist/Raidionics/Raidionics & sleep 5; kill -INT %+ | |
| # shell: bash | |
| # | |
| # - name: Test GUI startup | |
| # run: cd ${{github.workspace}}/tests && python software_launch_test.py | |
| - name: Make installer | |
| run: | | |
| mkdir -p assets/Raidionics_ubuntu/usr/local/bin | |
| cp -r dist/Raidionics assets/Raidionics_ubuntu/usr/local/bin | |
| dpkg-deb --build --root-owner-group assets/Raidionics_ubuntu | |
| ls -la | |
| cp -r assets/Raidionics_ubuntu.deb dist/Raidionics-1.2.2-ubuntu.deb | |
| - name: Upload package | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: Package | |
| path: ${{github.workspace}}/dist/Raidionics-* | |
| if-no-files-found: error |