Integrate with pynbody v2 #342
Workflow file for this run
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| name: Perform test database build and verification | |
| on: | |
| pull_request: | |
| workflow_dispatch: | |
| defaults: | |
| run: | |
| shell: bash | |
| jobs: | |
| build: | |
| strategy: | |
| fail-fast: true | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: [3.9] | |
| TANGOS_TESTING_DB_BACKEND: [sqlite] | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| C: gcc-10 | |
| CXX: g++-10 | |
| steps: | |
| - name: Install Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: actions/checkout@v2 | |
| - name: Update python pip/setuptools/wheel | |
| run: | | |
| python -m pip install --upgrade pip setuptools wheel | |
| - name: Build and install tangos | |
| run: | | |
| pip install -e . | |
| - name: Install latest pynbody | |
| run: python -m pip install pynbody | |
| - name: Install latest yt | |
| run: python -m pip install yt | |
| - name: Build test database | |
| working-directory: test_tutorial_build | |
| run: export INTEGRATION_TESTING=1; bash build.sh | |
| - uses: actions/upload-artifact@v2 | |
| with: | |
| name: Tangos database | |
| path: test_tutorial_build/data.db | |
| - name: Verify database | |
| working-directory: test_tutorial_build | |
| run: | | |
| wget https://zenodo.org/record/10051592/files/reference_database.db?download=1 -O reference_database.db -nv | |
| tangos diff data.db reference_database.db --property-tolerance dm_density_profile 1e-2 0 --property-tolerance gas_map 1e-2 0 --property-tolerance gas_map_sideon 1e-2 0 --property-tolerance gas_map_faceon 1e-2 0 | |
| # --property-tolerance dm_density_profile here is because if a single particle crosses between bins | |
| # (which seems to happen due to differing library versions), the profile can change by this much | |
| # | |
| # Images also occasionally differ by one or two particles. To deal with this previously had: | |
| # --ignore-value-of gas_map gas_map_faceon gas_map_sideon uvi_image uvi_image_sideon uvi_image_faceon |