fix wrong original seq id for provided replicons #326

oschwengers · Sep 24, 2024 · 7b529fb · 7b529fb
1 parent a68f625
commit 7b529fb
Showing 1 changed file with 0 additions and 1 deletion.
diff --git a/bakta/utils.py b/bakta/utils.py
@@ -460,7 +460,6 @@ def qc_contigs(contigs: Sequence[dict], replicons: Dict[str, dict]) -> Tuple[Seq
                     if(replicon['name']):
                         contig['name'] = replicon['name']
                     if(not cfg.keep_contig_headers):
-                        contig['orig_id'] = contig['id']
                         contig['id'] = replicon['new_locus_id'] if replicon['new_locus_id'] else contig['simple_id']
                     contig.pop('simple_id')