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fix missing original contig id in region logic when using --keep-cont… #59

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fix missing original contig id in region logic when using --keep-cont…

fix missing original contig id in region logic when using --keep-cont… #59

Run time

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Job Run time
Test (ubuntu-latest, 3.10)
4m 50s
Test (macos-latest, 3.10)
11m 13s
16m 3s