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1. nf-cmgg/germline nf-cmgg/germline Public

   A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data

   Nextflow 7 1

2. nf-cmgg/structural nf-cmgg/structural Public

   A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region expansions (RREs) from short DNA reads

   Nextflow 19 2

3. bedgovcf bedgovcf Public

   A simple tool to convert BED files to VCF files

   Go 4

4. svync svync Public

   A tool to standardize VCF files from structural variant callers

   Go

5. nextflow-io/nf-schema nextflow-io/nf-schema Public

   Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines

   Groovy 12 21