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Issues: nipreps/fmriprep

Write HOWTO read an fMRIPrep report
#1831 opened Oct 16, 2019 by oesteban
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300 Open 1,537 Closed
300 Open 1,537 Closed
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Issues list

Run level confusion documentation
#3403 opened Nov 25, 2024 by Hierakonpolis
3
Task: Push packages from GHA, enable OIDC (trusted publishing)
#3401 opened Nov 19, 2024 by effigies
Warn on --omp-nthreads > 8
#3398 opened Nov 14, 2024 by effigies
Add --platform linux/amd64 to fmriprep-docker
#3397 opened Nov 12, 2024 by effigies 24.2.0
loading of bids-filter-file crash on integer/float values bug
#3394 opened Nov 8, 2024 by bpinsard 24.2.0
@bpinsard
2
Move figures directory into session folder
#3392 opened Oct 29, 2024 by tsalo
Move HTML reports to subject or session folder
#3391 opened Oct 29, 2024 by tsalo
1
Meta-issue tracking difficulties merging separate runs
#3390 opened Oct 29, 2024 by tsalo
3 tasks
Weird fieldmap image induce misalignment in v24.0.0 bug
#3389 opened Oct 28, 2024 by Blink621
2
Field Maps Not Being Applied in FMRIPrep bug
#3386 opened Oct 22, 2024 by EmilyJD777
8
GM and CSF probsegs misnamed bug
#3377 opened Oct 9, 2024 by lundq163
2
Enable fieldmap jacobians by default only for PEPolar fieldmaps
#3367 opened Sep 27, 2024 by effigies
4
Jacobians are applied to coreg references, even if --ignore fmap-jacobian is passed bug
#3366 opened Sep 27, 2024 by effigies 24.1.1
Remove cohort entity and append cohort to space BIDS CIFTI / Grayordinates discussion impact: high Estimated high impact task
#3365 opened Sep 20, 2024 by tsalo
Process two-echo data like multi-echo without echo combination feature me-epi multiecho
#3364 opened Sep 18, 2024 by tsalo
fMRIprep did not generate multi echo outputs. bug me-epi multiecho
#3362 opened Sep 7, 2024 by TamerGezici
2
Gray band in edge region of carpet plot bug
#3359 opened Sep 3, 2024 by lobennett
2
Missing files (?) and error when using sMRIPrep +fMRIPrep bug
#3358 opened Aug 29, 2024 by araikes
3
cosine regressors documentation
#3351 opened Aug 22, 2024 by TrevorKMDay
4
fmriPrep seems to ignore the single band image. bug
#3350 opened Aug 22, 2024 by zhitao-guo
8
BOLD Summary Report node is included in the --anat-only workflow bug
#3349 opened Aug 22, 2024 by oesteban
BIDS filters file only accepts lowercase for modality-wise dictionaries (e.g., T1w -> t1w) bug
#3348 opened Aug 22, 2024 by oesteban
Fieldmap SDC from v24.0.0 seems to introduce artifact for some participants bug
#3347 opened Aug 20, 2024 by michael-s-cohen-2
fMRIPrep failed using --use-syn-sdc bug
#3343 opened Aug 15, 2024 by m9080212
2
The output of fmriprep is incomplete bug
#3332 opened Jul 24, 2024 by WangYunHong98
7
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