Pull request #656: Show atom details for the interaction of one ligan…

…d/residue with protein via the menu "Analysis > Interaction" and then the button "2D Interaction for One Ligand/Residue". Merge in STRUC/icn3d from release3340 to master * commit '5e0f656ad3e8e4b19855e42ebc2218e5be553533': Show atom details for the interaction of one ligand/residue with protein via the menu "Analysis > Interaction" and then the button "2D Interaction for One Ligand/Residue".
ncbi · Jul 29, 2024 · fa2e998 · fa2e998
2 parents a069d3d + 5e0f656
commit fa2e998
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,4 +1,6 @@
 ## Change Log
+[icn3d-3.34.0](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.34.0.zip) was release on July 29, 2024. Show atom details for the interaction of one ligand/residue with protein via the menu "Analysis > Interaction" and then the button "2D Interaction for One Ligand/Residue". 
+
 [icn3d-3.33.3](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.33.3.zip) was release on July 15, 2024. Switch electron density data from RCSB DSN6 to PDBe Density Server. 
 
 [icn3d-3.33.2](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.33.2.zip) was release on June 25, 2024. Enabled to measure angles between sets in the menu "Analysis > Angle". 

diff --git a/LICENSE.md b/LICENSE.md
diff --git a/README.md b/README.md
diff --git a/SECURITY.md b/SECURITY.md
diff --git a/build/icn3d.js b/build/icn3d.js
diff --git a/build/icn3d.min.js b/build/icn3d.min.js
diff --git a/build/icn3d.module.js b/build/icn3d.module.js
diff --git a/dist/CHANGELOG.md b/dist/CHANGELOG.md
@@ -1,4 +1,6 @@
 ## Change Log
+[icn3d-3.34.0](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.34.0.zip) was release on July 29, 2024. Show atom details for the interaction of one ligand/residue with protein via the menu "Analysis > Interaction" and then the button "2D Interaction for One Ligand/Residue". 
+
 [icn3d-3.33.3](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.33.3.zip) was release on July 15, 2024. Switch electron density data from RCSB DSN6 to PDBe Density Server. 
 
 [icn3d-3.33.2](https://www.ncbi.nlm.nih.gov/Structure/icn3d/icn3d-3.33.2.zip) was release on June 25, 2024. Enabled to measure angles between sets in the menu "Analysis > Angle". 

diff --git a/dist/LICENSE.md b/dist/LICENSE.md
diff --git a/dist/README.md b/dist/README.md
diff --git a/dist/full.html b/dist/full.html
@@ -19,11 +19,11 @@
   <div id="div0"></div>
 
   <link rel="stylesheet" href="lib/jquery-ui-1.13.2.min.css">
-  <link rel="stylesheet" href="icn3d_3.33.3.css">
+  <link rel="stylesheet" href="icn3d_3.34.0.css">
   <script src="lib/jquery-3.5.0.min.js"></script>
   <script src="lib/jquery-ui-1.13.2.min.js"></script>
   <script src="lib/three_0.151.0.min.js"></script>
-  <script src="icn3d_3.33.3.min.js"></script>
+  <script src="icn3d_3.34.0.min.js"></script>
 
   <script type="text/javascript">
 
@@ -41,7 +41,7 @@
           alert("IE does NOT work with the current iCn3D version 3. The old iCn3D version 2 is used instead.");
       }
       else {
-          //$.getScript('icn3d_3.33.3.min.js', function() {
+          //$.getScript('icn3d_3.34.0.min.js', function() {
             var version = 3;
             await launchIcn3d(version); //await 
           //});

diff --git a/dist/full2.html b/dist/full2.html
@@ -20,11 +20,11 @@
   <div id="div1" style="float:left;"></div>
 
   <link rel="stylesheet" href="lib/jquery-ui-1.13.2.min.css">
-  <link rel="stylesheet" href="icn3d_3.33.3.css">
+  <link rel="stylesheet" href="icn3d_3.34.0.css">
   <script src="lib/jquery-3.5.0.min.js"></script>
   <script src="lib/jquery-ui-1.13.2.min.js"></script>
   <script src="lib/three_0.151.0.min.js"></script>
-  <script src="icn3d_3.33.3.min.js"></script>
+  <script src="icn3d_3.34.0.min.js"></script>
 
   <script type="text/javascript">
     $( document ).ready(async function() {
@@ -41,7 +41,7 @@
           alert("IE does NOT work with the current iCn3D version 3. The old iCn3D version 2 is used instead.");
       }
       else {
-          //$.getScript('icn3d_3.33.3.min.js', function() {
+          //$.getScript('icn3d_3.34.0.min.js', function() {
             var version = 3;
             await launchIcn3d(version);
           //});

diff --git a/dist/full2_3.33.3.html → dist/full2_3.34.0.html b/dist/full2_3.33.3.html → dist/full2_3.34.0.html
@@ -20,11 +20,11 @@
   <div id="div1" style="float:left;"></div>
 
   <link rel="stylesheet" href="lib/jquery-ui-1.13.2.min.css">
-  <link rel="stylesheet" href="icn3d_3.33.3.css">
+  <link rel="stylesheet" href="icn3d_3.34.0.css">
   <script src="lib/jquery-3.5.0.min.js"></script>
   <script src="lib/jquery-ui-1.13.2.min.js"></script>
   <script src="lib/three_0.151.0.min.js"></script>
-  <script src="icn3d_3.33.3.min.js"></script>
+  <script src="icn3d_3.34.0.min.js"></script>
 
   <script type="text/javascript">
     $( document ).ready(async function() {
@@ -41,7 +41,7 @@
           alert("IE does NOT work with the current iCn3D version 3. The old iCn3D version 2 is used instead.");
       }
       else {
-          //$.getScript('icn3d_3.33.3.min.js', function() {
+          //$.getScript('icn3d_3.34.0.min.js', function() {
             var version = 3;
             await launchIcn3d(version);
           //});

diff --git a/dist/full_3.33.3.html → dist/full_3.34.0.html b/dist/full_3.33.3.html → dist/full_3.34.0.html
@@ -19,11 +19,11 @@
   <div id="div0"></div>
 
   <link rel="stylesheet" href="lib/jquery-ui-1.13.2.min.css">
-  <link rel="stylesheet" href="icn3d_3.33.3.css">
+  <link rel="stylesheet" href="icn3d_3.34.0.css">
   <script src="lib/jquery-3.5.0.min.js"></script>
   <script src="lib/jquery-ui-1.13.2.min.js"></script>
   <script src="lib/three_0.151.0.min.js"></script>
-  <script src="icn3d_3.33.3.min.js"></script>
+  <script src="icn3d_3.34.0.min.js"></script>
 
   <script type="text/javascript">
 
@@ -41,7 +41,7 @@
           alert("IE does NOT work with the current iCn3D version 3. The old iCn3D version 2 is used instead.");
       }
       else {
-          //$.getScript('icn3d_3.33.3.min.js', function() {
+          //$.getScript('icn3d_3.34.0.min.js', function() {
             var version = 3;
             await launchIcn3d(version); //await 
           //});

diff --git a/dist/icn3d-3.33.3.zip → dist/icn3d-3.34.0.zip b/dist/icn3d-3.33.3.zip → dist/icn3d-3.34.0.zip
diff --git a/dist/icn3d.html b/dist/icn3d.html
@@ -3022,6 +3022,13 @@ <h3>Codeathon/Workshop Contributors<img src="https://www.ncbi.nlm.nih.gov/Struct
 <li><b>2023 DiscoveryBMB Workshop</b>, <a href="https://discoverbmb.asbmb.org/program/workshops"><b>Basics of the iCn3D program, a user-friendly tool for biomolecular modeling</b></a>: (Organizers: Kristen Procko, Henry Jakubowski, Josh T. Beckham, Daniel Dries, Shane Austin, Pamela Mertz)</li>
 -->
 
+<li><b>2024 BOSC CollaborationFest</b>
+    <ul>
+        <li><a href="https://docs.google.com/presentation/d/18ngHmbKoNbCGHTU0CO1gHQD6oSaqCbmC/edit#slide=id.g27856995fd9_0_9"><b>Displaying Protein-Ligand Interactions in iCn3D</b></a>: Jiyao Wang, Ravinder Abrol, Philippe Youkharibache<br><br></li>
+        <li><a href="https://docs.google.com/presentation/d/18ngHmbKoNbCGHTU0CO1gHQD6oSaqCbmC/edit#slide=id.g27856995fd9_0_9"><b>Combining JBrowse2 and iCn3D</b></a>: Colin Diesh, Jiyao Wang, Francois Belleau, Philippe Youkharibache, Ravi Abrol<br><br></li>
+    </ul>
+</li>
+
 </ul>
 <br>