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mrperkett/README.md

Introducing myself

Hello, I'm Matt. I am a scientific computing expert experienced in data science, software development, and algorithm development in bioinformatics.

I have spent the last eight years working as a bioinformatician in the biotech industry helping to drive advances in CRISPR and RNAi through research and product development. Before that, I completed a computationally-focused Physics Ph.D. at Brandeis University where I studied protein self-assembly and conformational dynamics using rare event simulation methods. I also have a background in computer science and computational astrophysics from undergrad studies and research.

Projects

Check out my GitHub Portfolio for a list of my recent projects.

Interests

📊 data science 🧬 bioinformatics 🧮 algorithm development </> software development 📖 machine learning 🐍 Python

If a project involves analyzing data, writing software, or designing an algorithm, chances are that I would find it interesting! Recently, my focus has been on machine learning and bioinformatics projects. If you have an idea for a project, please reach out. I'd love to collaborate!

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  1. portfolio portfolio Public

    Matt Perkett professional portfolio

  2. genome-kmers genome-kmers Public

    Fast Python implementation for genome k-mer calculations

    Python

  3. ICA-audio-deconvolution ICA-audio-deconvolution Public

    Independent Component Analysis example deconvoluting mixed audio samples.

    Jupyter Notebook

  4. udacity-customer-segment-analysis udacity-customer-segment-analysis Public

    Unsupervised learning to identify customer segments using Germany demographics data

    Jupyter Notebook