Dev #221
Workflow file for this run
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# This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
name: CI | |
# define when this workflow is triggered | |
on: | |
workflow_dispatch: | |
pull_request: | |
push: | |
branches: | |
- main | |
# cancel any currently running workflows in this same PR | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
# Use bash by default in all jobs | |
defaults: | |
run: | |
shell: bash -el {0} | |
jobs: | |
# run pre-commit which includes many formatting and linting tools | |
pre-commit: | |
name: Format | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: "3.x" | |
- uses: pre-commit/[email protected] | |
with: | |
extra_args: --hook-stage manual --all-files | |
- name: Run PyLint | |
run: pipx run nox -s pylint -- --output-format=github | |
# Run tests and upload to codecov | |
test: | |
name: Check Python ${{ matrix.python-version }} on ${{ matrix.runs-on }} | |
runs-on: ${{ matrix.runs-on }} | |
if: | | |
${{!startsWith(github.event.head_commit.message, 'docs:') }} || | |
${{!startsWith(github.event.head_commit.message, 'style:') }} | |
needs: [pre-commit] | |
strategy: | |
# Otherwise, the workflow would stop if a single job fails. We want to | |
# run all of them to catch failures in different combinations. | |
fail-fast: false | |
matrix: | |
python-version: ["3.9", "3.10", "3.11", "3.12"] | |
runs-on: [ubuntu-latest, macos-latest, windows-latest] | |
env: | |
FORCE_COLOR: 3 | |
NUMBA_DISABLE_JIT: "1" | |
timeout-minutes: 30 | |
steps: | |
# Checkout current git repository | |
- name: Checkout | |
uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
- name: Switch to Current Branch | |
run: git checkout ${{ env.BRANCH }} | |
- name: Get current week number of year | |
id: date | |
run: echo "date=$(date +%Y-W%W)" >> $GITHUB_OUTPUT # e.g., 2024-W19 | |
# Install Micromamba with conda-forge dependencies | |
- name: Setup Micromamba | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: env/testing_env.yml | |
create-args: >- | |
python=${{ matrix.python-version }} | |
post-cleanup: "all" | |
cache-downloads: false | |
# environment cache is persistent for one week. | |
cache-environment-key: | |
micromamba-environment-${{ steps.date.outputs.date }} | |
# Install the package that we want to test | |
- name: Install the package | |
run: pip install --no-deps -e . | |
- name: Run the tests | |
run: >- | |
pytest -m "not fetch and not issue" -ra --cov --cov-report=xml | |
--cov-report=term --durations=20 | |
- name: Upload coverage report | |
uses: codecov/[email protected] | |
env: | |
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} |