McCortex 1.0.1

Report the correct version string
Add missing files to compile for -march=native

McCortex 1.0

mccortex-1.0

results: small changes to generating plots

McCortex 0.2

Minor bugfixes and re-arranged scripts.

McCortex 0.1.1

Changelog:

• server command: read graph from disk
• vcfcov command: default to low memory mode
• build,clean commands: write sorted graph files
• clean command: faster cleaning
• fix rare multithreading bug in db_unitig.c
• mccortex-server.py: multithreaded HTTP JSON server
• hash_table.c: faster initialisation of large hash tables
• update dependency libraries
• better integration tests

McCortex Version 0.1.0

Commands are quite stable now. McCortex has been used on various mammalian and bacterial WGS data sets without issue.

McCortex Version 0.0.4

Path file format has been updated - it is now a gzipped text file (.ctp.gz) with a JSON header. Many commands have been improved with more features and common options.