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JugLab

GitHub for the JugLab

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  1. n2v n2v Public

    This is the implementation of Noise2Void training.

    Python 411 112

  2. EmbedSeg EmbedSeg Public

    Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images

    Python 112 23

  3. FourierImageTransformer FourierImageTransformer Public

    Fourier Image Transformer (FIT) can solve relevant image analysis tasks in Fourier space.

    Python 96 13

  4. pn2v pn2v Public

    This is our implementation of Probabilistic Noise2Void

    Python 73 10

  5. DenoiSeg DenoiSeg Public

    Joint training of denoising and segmentation.

    Jupyter Notebook 69 21

  6. PPN2V PPN2V Public

    Code Implementation for the publication "Fully Unsupervised Probabilistic Noise2Void"

    Python 55 9

Repositories

Showing 10 of 90 repositories
  • featureforest Public

    A napari plugin for segmentation using features from vision transformers

    juglab/featureforest’s past year of commit activity
    Python 12 BSD-3-Clause 0 2 0 Updated Dec 1, 2024
  • cellpose-bmz-wrapper Public

    A wrapper to pack cellpose model for bioimage model zoo

    juglab/cellpose-bmz-wrapper’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Nov 25, 2024
  • MultiOmicsCellSim Public

    Cell Simulator to map parametrical distributions into various modalities

    juglab/MultiOmicsCellSim’s past year of commit activity
    Jupyter Notebook 1 GPL-3.0 0 0 0 Updated Nov 21, 2024
  • labkit-ui Public

    Advanced Tool for Labeling And Segmentation

    juglab/labkit-ui’s past year of commit activity
    Java 34 BSD-2-Clause 21 58 3 Updated Oct 21, 2024
  • uSplit Public
    juglab/uSplit’s past year of commit activity
    Python 7 MIT 3 3 0 Updated Oct 17, 2024
  • MicroSSIM Public

    Range Invariant SSIM

    juglab/MicroSSIM’s past year of commit activity
    Jupyter Notebook 1 BSD-3-Clause 0 1 0 Updated Sep 21, 2024
  • juglab/labkit-pixel-classification’s past year of commit activity
    Java 6 BSD-2-Clause 6 2 0 Updated Aug 29, 2024
  • juglab/bioimageio-uploader’s past year of commit activity
    Svelte 0 2 0 0 Updated Aug 28, 2024
  • juglab/AI4LifeSubmissions’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Jul 30, 2024
  • juglab/denoiSplit’s past year of commit activity
    Jupyter Notebook 2 BSD-3-Clause 1 0 0 Updated Jul 12, 2024

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