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Version 1.4.0 - Faster Typing & MST Extension

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@infinity-a11y infinity-a11y released this 21 Jun 12:59
· 176 commits to master since this release
v1.4.0
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Learn about vigilant mode.

Besides various improvements, changes and fixes, the release 1.4.0 introduces parallelized algorithms speeding up the typing process by a factor of 4 to 5. Moreover, minimum-spanning trees now feature the option to map variables to the node color. This way, epidemiologic metadata such as country/city of sample acquisition, isolation date or any other custom variable can enrich the analysis with valuable information. In case identical isolates carry different values for the selected variable, the nodes transition to pie charts showing the respective share of several values for the identical group (see attached image). A new scheme for Klebsiella oxytoca sensu lato was added to the cgMLST.org database and made available in this version of PhyloTrace.

  • Accelerated typing through parallelization
  • Minimum-spanning tree functionality extended by variable mapping feature (pie charts as nodes)
  • Minor UI changes
  • Miscellaneous bugfixes
  • New scheme for Klebsiella oxytoca sensu lato

Screenshot from 2024-06-21 10-56-40

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