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fix "misplace &"
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tpietzsch authored Sep 9, 2024
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Expand Up @@ -170,7 +170,7 @@ We prepared a 2D and 3D version of a tiled dataset for testing the BigStitcher o

### 2D multi-tile dataset (2.8 MB)

This dataset is a maximum intensity projection of the nervous system of a Drosophila larva containing 6 tiles and 3 channels each. You can download the raw input at http://preibischlab.mdc-berlin.de/BigStitcher/Grid_2d.zip> and a reconstructed BigStitcher project at <http://preibischlab.mdc-berlin.de/BigStitcher/Grid_2d_h5_aligned.zip. In the reconstructed project, the images were imported into the BigStitcher using the AutoLoader (with immediate resaving as HDF5 and Movement to a regular 2-by-3 grid with 10% overlap between the tiles). We calculated pairwise shifts using phase correlation with default parameters, using the precomputed 2x2 downsampling and averaging the channels. We ignored links with correlation $$&lt;0.7$$ and calculated the final registration using the two-round global optimization with strict constraints.
This dataset is a maximum intensity projection of the nervous system of a Drosophila larva containing 6 tiles and 3 channels each. You can download the raw input at http://preibischlab.mdc-berlin.de/BigStitcher/Grid_2d.zip> and a reconstructed BigStitcher project at <http://preibischlab.mdc-berlin.de/BigStitcher/Grid_2d_h5_aligned.zip. In the reconstructed project, the images were imported into the BigStitcher using the AutoLoader (with immediate resaving as HDF5 and Movement to a regular 2-by-3 grid with 10% overlap between the tiles). We calculated pairwise shifts using phase correlation with default parameters, using the precomputed 2x2 downsampling and averaging the channels. We ignored links with correlation $$<0.7$$ and calculated the final registration using the two-round global optimization with strict constraints.

### 3D multi-tile dataset (123 MB)

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