Add compress_detdata to save_hdf5 operator #1194
Workflow file for this run
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| # Use pre-built docker containers to run our unit tests on different python versions. | |
| # | |
| # In general, we try to run on: | |
| # - The oldest supported python | |
| # - The latest stable python that is the common default on most systems and conda | |
| # - (During transitions) The newly released bleeding edge python | |
| name: Run Test Suite | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| branches: | |
| - master | |
| - toast3 | |
| jobs: | |
| test: | |
| name: Tests on ${{ matrix.arch }} with Conda Python-${{ matrix.python }} | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - os: ubuntu-latest | |
| python: "3.8" | |
| arch: Linux-x86_64 | |
| ompdisable: 0 | |
| - os: ubuntu-latest | |
| python: "3.10" | |
| arch: Linux-x86_64 | |
| ompdisable: 0 | |
| - os: ubuntu-latest | |
| python: "3.11" | |
| arch: Linux-x86_64 | |
| ompdisable: 0 | |
| - os: macos-latest | |
| python: "3.9" | |
| arch: MacOSX-x86_64 | |
| ompdisable: 1 | |
| - os: macos-latest | |
| python: "3.10" | |
| arch: MacOSX-x86_64 | |
| ompdisable: 1 | |
| - os: macos-latest | |
| python: "3.11" | |
| arch: MacOSX-x86_64 | |
| ompdisable: 1 | |
| steps: | |
| - name: Cancel Previous Runs | |
| uses: styfle/[email protected] | |
| with: | |
| access_token: ${{ github.token }} | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Setup Conda Base | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| miniconda-version: "latest" | |
| channels: conda-forge | |
| use-only-tar-bz2: true # IMPORTANT: Needs for caching to work properly! | |
| auto-update-conda: true | |
| auto-activate-base: true | |
| - name: Check Conda Config | |
| run: | | |
| conda info | |
| conda list | |
| conda config --show-sources | |
| conda config --show | |
| - name: Create Conda Env | |
| run: | | |
| ./platforms/conda_dev_setup.sh toast yes ${{ matrix.python }} | |
| - name: Install | |
| run: | | |
| conda activate toast | |
| export TOAST_BUILD_DISABLE_OPENMP=${{ matrix.ompdisable }} | |
| ./platforms/conda.sh | |
| - name: Run Serial Tests | |
| run: | | |
| conda activate toast | |
| export OMP_NUM_THREADS=2 | |
| export MPI_DISABLE=1 | |
| python3 -c 'import toast.tests; toast.tests.run()' | |
| unset MPI_DISABLE | |
| unset OMP_NUM_THREADS | |
| - name: Run MPI Tests | |
| run: | | |
| conda activate toast | |
| export OMP_NUM_THREADS=1 | |
| mpirun -np 2 python -c 'import toast.tests; toast.tests.run()' | |
| unset OMP_NUM_THREADS | |