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7. Glossary

Abdurrahman Abul-Basher edited this page Jul 8, 2021 · 3 revisions
Name Description
Community A community is comprised of a set of nodes on a network that is densely connected internally. See Community structure.
EC number Enzyme Commission number.
Embedding A low-dimensional latent continuous feature extracted from each node of a network. Read our paper for more details.
Features Individual independent variables that act as input in a system. While making predictions, models use these features.
Graph A graph is a structure consisting of a set of objects where some pairs of these objects are semantically or structurally "related". See Graph.
Heterogeneous information network A multi-layer network where nodes within a layer manifest inter-interactions and nodes between layers manifest betweenness interactions. Read our paper for more details.
NCBI National Center for Biotechnology Information.
NMF Non-negative matrix factorization.
PGDBs Pathway/Genome Databases.

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