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Autotests: #6003 - autotests allow import and export of sequences with three letter amino acid codes #6010

Merged
merged 13 commits into from
Nov 26, 2024
Merged

Autotests: #6003 - autotests allow import and export of sequences with three letter amino acid codes #6010

merged 13 commits into from
Nov 26, 2024

Commits on Nov 21, 2024

  1. First draft

    @AlexeyGirin
    AlexeyGirin committed Nov 21, 2024
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Commits on Nov 22, 2024

  1. Merge branch 'master' of https://github.com/epam/ketcher into 6003-au… 

    …totests-allow-import-and-export-of-sequences-with-three-letter-amino-acid-codes
    @AlexeyGirin
    AlexeyGirin committed Nov 22, 2024
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  2. First draft

    @AlexeyGirin
    AlexeyGirin committed Nov 22, 2024
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  3. Verify import with valid three-letter codes in the sequence

    @AlexeyGirin
    AlexeyGirin committed Nov 22, 2024
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  4. Verify that spaces separate different amino acid sequences in import

    @AlexeyGirin
    AlexeyGirin committed Nov 22, 2024
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  5. Verify ignoring of line breaks during import

    @AlexeyGirin
    AlexeyGirin committed Nov 22, 2024
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Commits on Nov 25, 2024

  1. Merge branch 'master' of https://github.com/epam/ketcher into 6003-au… 

    …totests-allow-import-and-export-of-sequences-with-three-letter-amino-acid-codes
    @AlexeyGirin
    AlexeyGirin committed Nov 25, 2024
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  2. 4. Verify error message for unsupported symbols in import 

    5. Verify error for incorrect formatting in import (uppercase/lowercase mix)
6. Verify error when a three-letter sequence cannot be matched to amino acids(e.g. "Alx")
    @AlexeyGirin
    AlexeyGirin committed Nov 25, 2024
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  3. 9. Verify export with non-standard ambiguous amino acids 

    10. Verify that non pure peptide sequences are prevented from exporting
    @AlexeyGirin
    AlexeyGirin committed Nov 25, 2024
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  4. 11. Verify natural analogue conversion on export 

    12. Verify specific export format for "Any amino acid
13. Verify export format for ambiguous amino acids
14. Verify that multiple sequences are separated by space in exported file
    @AlexeyGirin
    AlexeyGirin committed Nov 25, 2024
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  5. Bug fix

    @AlexeyGirin
    AlexeyGirin committed Nov 25, 2024
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Commits on Nov 26, 2024

  1. Merge branches '6003-autotests-allow-import-and-export-of-sequences-w… 

    …ith-three-letter-amino-acid-codes' and 'master' of https://github.com/epam/ketcher into 6003-autotests-allow-import-and-export-of-sequences-with-three-letter-amino-acid-codes
    @AlexeyGirin
    AlexeyGirin committed Nov 26, 2024
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  2. Fixes

    @AlexeyGirin
    AlexeyGirin committed Nov 26, 2024
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