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1. SSV-Conta SSV-Conta Public

   SSV-Conta quantify and characterize DNA contaminants from gene therapy vector sequenced by Illumina system.

   2

2. ContaVect ContaVect Public

   Forked from a-slide/ContaVect

   Analyse DNA contaminants from NGS data

   Python 1 1

3. Quade Quade Public

   Forked from a-slide/Quade

   Demultiplexer for PAIRED fastq files based on index sequence and PHRED quality (pure python)

   Python

4. Sekator Sekator Public

   Forked from a-slide/Sekator

   Multithreaded quality and adapter trimmer for PAIRED fastq files (Python2.7/Cython/C)

   Python

5. SSV-Coverage SSV-Coverage Public

   Forked from mathieubolteau/SSV-Coverage

   Coverage graph creator from BAM files (included in the SSV-Conta package)

   Python

6. NTContent NTContent Public

   Forked from guyduche/NTContent

   C