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@eQTL-Catalogue

eQTL Catalogue

eQTL Catalogue development team

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  1. qtlmap qtlmap Public

    Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue

    R 45 13

  2. genimpute genimpute Public

    Portable genotype imputation pipeline used by the eQTL Catalogue

    Nextflow 5 2

  3. qcnorm qcnorm Public

    This pipeline will run QC measures of both genotype and phenotype data and will normalise quantified phenotypes

    Nextflow 5 4

  4. rnaseq rnaseq Public

    RNA-seq quantification pipeline used by the eQTL Catalogue

    Nextflow 5 7

  5. eQTL-Catalogue-resources eQTL-Catalogue-resources Public

    HTML 42 35

Repositories

Showing 10 of 13 repositories
  • qtlmap Public

    Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue

    eQTL-Catalogue/qtlmap’s past year of commit activity
    R 45 MIT 13 5 0 Updated Oct 31, 2024
  • eQTL-Catalogue-resources Public
    eQTL-Catalogue/eQTL-Catalogue-resources’s past year of commit activity
    HTML 42 35 1 1 Updated Oct 30, 2024
  • eQTL-Catalogue-website Public Forked from ebiwd/EBI-Boilerplate-Jekyll

    Get up and running with EBI-themed Jekyll fast (rolled with gh-pages in mind, clone/fork suggested)

    eQTL-Catalogue/eQTL-Catalogue-website’s past year of commit activity
    HTML 1 8 0 1 Updated Oct 3, 2024
  • eQTL-SumStats Public

    eQTL Catalogue Summary Statistics

    eQTL-Catalogue/eQTL-SumStats’s past year of commit activity
    Python 3 1 7 12 Updated Jul 9, 2024
  • qcnorm Public

    This pipeline will run QC measures of both genotype and phenotype data and will normalise quantified phenotypes

    eQTL-Catalogue/qcnorm’s past year of commit activity
    Nextflow 5 MIT 4 3 0 Updated Jan 15, 2024
  • genimpute Public

    Portable genotype imputation pipeline used by the eQTL Catalogue

    eQTL-Catalogue/genimpute’s past year of commit activity
    Nextflow 5 Apache-2.0 2 0 0 Updated Jan 3, 2024
  • rnaseq Public

    RNA-seq quantification pipeline used by the eQTL Catalogue

    eQTL-Catalogue/rnaseq’s past year of commit activity
    Nextflow 5 MIT 7 0 1 Updated Mar 5, 2023
  • federated-analysis Public
    eQTL-Catalogue/federated-analysis’s past year of commit activity
    Python 0 0 0 0 Updated May 26, 2022
  • genotype_qc Public archive

    Workflows for performing genotype QC before and after imputation

    eQTL-Catalogue/genotype_qc’s past year of commit activity
    Nextflow 4 Apache-2.0 0 0 0 Updated Dec 17, 2021
  • susie-workflow Public archive

    Nextflow workflow for applying SuSiE finemapping model to a large number of molecular QTLs

    eQTL-Catalogue/susie-workflow’s past year of commit activity
    R 8 Apache-2.0 3 0 0 Updated Dec 17, 2021
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