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check exit code before joining multiprocessing #34

Merged
merged 13 commits into from
May 13, 2024
Merged

check exit code before joining multiprocessing #34

merged 13 commits into from
May 13, 2024

Commits on Feb 8, 2024

  1. b2w: check exit code for multiprocessing

    @LaraFuhrmann
    LaraFuhrmann committed Feb 8, 2024
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  2. [shotgun] check exitcode before joining processes

    @LaraFuhrmann
    LaraFuhrmann committed Feb 8, 2024
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Commits on Feb 12, 2024

  1. correct debug message

    @LaraFuhrmann
    LaraFuhrmann committed Feb 12, 2024
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Commits on Feb 14, 2024

  1. correct debug message

    @LaraFuhrmann
    LaraFuhrmann committed Feb 14, 2024
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Commits on Apr 22, 2024

  1. fix vcf method

    @LaraFuhrmann
    LaraFuhrmann committed Apr 22, 2024
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Commits on Apr 24, 2024

  1. add flag for optional appplication of strand bias filter

    @LaraFuhrmann
    LaraFuhrmann committed Apr 24, 2024
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  2. add flag for optional appplication of strand bias filter

    @LaraFuhrmann
    LaraFuhrmann committed Apr 24, 2024
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  3. fix case stand_bias filter false

    @LaraFuhrmann
    LaraFuhrmann committed Apr 24, 2024
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Commits on Apr 25, 2024

  1. fix last window going over the end of reference seq

    @LaraFuhrmann
    LaraFuhrmann committed Apr 25, 2024
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  2. fix last window going over the end of reference seq

    @LaraFuhrmann
    LaraFuhrmann committed Apr 25, 2024
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  3. fix last window

    @LaraFuhrmann
    LaraFuhrmann committed Apr 25, 2024
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  4. adapt test

    @LaraFuhrmann
    LaraFuhrmann committed Apr 25, 2024
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Commits on May 2, 2024

  1. Fix b2w (#35) 

    * return to before, make ref2binary okay for Ns

* remove duplicate function update_tiling()

* add new variable original_minimum_overlap for exteneded_window_mode since last_aligned_pos is in orignal reference genome space
    @LaraFuhrmann
    LaraFuhrmann authored May 2, 2024
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