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fix vcf method
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LaraFuhrmann committed Apr 22, 2024
1 parent 755d344 commit 2543c0c
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion viloca/shorah_snv.py
Original file line number Diff line number Diff line change
Expand Up @@ -529,7 +529,7 @@ def main(args):
VCF_meta = [
"##fileformat=VCFv4.2",
f"##fileDate={date.today():%Y%m%d}",
f"##source=ShoRAH_{args.version}",
f"##source=VILOCA",
f"##reference={args.f}",
]
ref_m = dict([[s.id, str(s.seq).upper()] for s in SeqIO.parse(reference, "fasta")])
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