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change default viloca mode
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LaraFuhrmann committed Jun 6, 2024
1 parent 98438cb commit 005909b
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion tests/data_1/shotgun_test.sh
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
#!/bin/bash

viloca run -a 0.1 -w 201 -x 100000 -p 0.9 -c 0 \
viloca run -a 0.1 -w 201 --mode shorah -x 100000 -p 0.9 -c 0 \
-r HXB2:2469-3713 -R 42 -f test_ref.fasta -b test_aln.cram --out_format csv "$@"

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