Skip to content

castro-gzlz/TESS-cont

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

TESS-cont: The TESS contamination tool

TESS-cont is a user-friendly Python tool to quantify the flux fraction coming from nearby stars in the TESS photometric aperture of any observed target. The package (1) identifies the main contaminant Gaia DR2/DR3 sources, (2) quantifies their individual and total flux contributions to the aperture, and (3) determines whether any of these stars could be the origin of the observed transit and variability signals.

Presentación sin título(2)-cropped

The TESS-cont algorithm is based on building the pixel response functions (PRFs) of nearby Gaia sources and computing their flux distributions across the TESS Target Pixel Files (TPFs) or Full Frame Images (FFIs). A more detailed description can be found in Section 2.1.2 of this work.

Installation & Requirements

Clone or download this folder on your computer. All the dependencies are widely used, so you probably already have them installed. However, if this is not the case, you can enter the folder via the terminal and type

pip install -r requirements.txt

If you have any problems with the installation, you can drop an issue here.

Usage

TESS-cont is very easy to use. It only requires the TIC/TOI number (or Simbad name) of the target star to study, although it can also have a flexible operation based on different optional parameters.

Python through the terminal

You just need to have a configuration file (e.g. TOI-5005_S65.ini) inside the config folder and type

python TESS-cont.py TOI-5005_S65.ini

In the Configuration file section we describe all the parameters that can be used.

Python through Jupyter Notebook

TESS-cont can also be used via Jupyter Notebook (TESS-cont.ipynb). Similarly to the terminal version, you just need to select a configuration file and run all cells.

Usage examples

Example 1: A TIC number is all you need

In this example, we specify the TIC number of TOI-5005 (TIC 282485660) to quantify the flux contributions to its SPOC photometric aperture in Sector 65.

python TESS-cont.py TOI-5005_S65.ini

example1

The left-hand plot is a heatmap indicating the flux percentage from the target star falling within each pixel. As we can see, inside the aperture, TOI-5005 contributes between 60% and 90% of the total flux, depending on the considered pixel. The disk sizes are scaled to the emitted fluxes.

The right-hand plot is a pie chart representing the flux from the target and nearby stars inside the photometric aperture. Overall, TOI-5005 contributes 84.4% to the measured photometry, while the remaining 15.6% comes from different nearby sources. Interestingly, the second most contaminant star (Star 2) is a very bright source located outside the TESS Target Pixel File (TPF). This example shows the usefulness of TESS-cont to identify not evident contaminant sources that could be otherwise overlooked.

Example 2: Possible origins of the transit (and variability) signals

We now study the star TOI-4479. As we can see, the field is less crowded (there are fewer white disks) but the SPOC photometry is more contaminated, with a total contaminant flux fraction of 30.4% inside the aperture.

python TESS-cont.py TOI-4479_S41.ini

example2

This star was found to have a planet candidate, TOI-4479.01, with a transit depth of 3471 ppm (parts per million) according to ExoFOP, which was later confirmed to be a planet by Esparza-Borges et al. (2022). We here use the TESS-cont DILUTION feature to know whether we can discard the nearby contaminant sources as being the origin of the signal found based on the TESS photometry alone. By introducing the measured transit depth, and selecting dilution_corr: True (since the SPOC transit depths are already corrected for dilution), we find that the observed transit signal could have originated in the six most contaminant stars with the following depths:

Star,Gaia_ID,transit_depth(%)
1,1841177816084707584,1.74
2,1841177816084683648,6.10
3,1841178129618984960,8.256
4,1841177717302124288,11.30
5,1841178232698201216,24.35
6,1841177682942388608,27.69

Since those values (2-28%) are lower than the unphysical threshold of 100%, we cannot discard that they could be the origin of the transit signal found based on the TESS data alone (e.g. Castro-González et al. 2020; de Leon et al. 2021). This example reveals the necessity of higher-spatial resolution observations (e.g. ground-based photometry or spectroscopy) to confidently discard those contaminant sources.

Computational cost: Approximate (fast) vs accurate (slower) method

By default, TESS-cont interpolates the PRFs to all the pixels with Gaia sources, which might take several minutes. To streamline this process, we have implemented a fast approximate method that can be easily activated through method_prf: approximate within the OPTIONAL section. This method interpolates the PRF only once (in the middle of the TPF/FFI), before locating it in its corresponding position, assuming that its shape does not vary much across the nearby pixels.

This approximate method typically provides very similar results to the default method_prf: accurate method, so it can be useful to have a first hint of the contamination level affecting your target (especially in highly crowded fields). However, we encourage to use the accurate method for final analyses/publications. We have coded TESS-cont so that the PRFs of stars in common pixels are only computed once, and hence even in highly crowded fields the computational cost should not surpass ~5 minutes.

Other uses, contamination metrics, and precautions

Other uses. TESS-cont can be also used to generate custom apertures based on the computed pixel-by-pixel contamination. We can select a certain threshold (e.g. 80%) of flux coming from the target star, and generate and save an aperture that meets such a threshold. This feature is currently not documented, but you can drop me a message and I'll be happy to help.

Contamination metrics. A by-product of the TESS-cont operation is the computation of the CROWDSAP and FLFRCSAP metrics. These are automatically saved in the metrics.dat file. We encourage ensuring that there are no major differences with the official TESS metrics. If this were the case, it could be probably related to a discrepancy between the DR3 and DR2 Gaia catalogues.

Precautions. By default, TESS-cont uses the Gaia DR3 catalogue. However, the TIC catalogue (and SPOC PDCSAP) is stacked to Gaia DR2. Therefore, to analyze the TESS PDCSAP photometry the DR2 catalog should be selected as an OPTIONAL parameter: gaia_catalog: DR2. We highly encourage running TESS-cont based on the DR2 AND DR3 catalogues to ensure that there are no major differences. If there were, it would be recommended to use the DR3 contamination metrics to correct the PDCSAP/SAP photometry from crowding as explained here.

Configuration file

[MANDATORY] | Mandatory parameter

Parameter Possible values Description
target Any TIC, TOI, or star's name resoluble in Simbad Target star identifier

[OPTIONAL] | Optional parameters

Parameter Possible values Description
sector Any number TESS sector. Default: first with observations
method_prf accurate or approximate Method to compute the PRFs. Default: accurate
search_radius Any number Search radius of Gaia sources (in arcsec). Default: 200
n_sources Any number Contaminant sources to study individually. Default: 5
gaia_catalog DR2 or DR3 Gaia catalog. Default: DR3
target_name Any name Target name. Default: Target
plot_target_name True or False Specify the target name in the plot. Default: False
plot_all_gaia True or False Plot all Gaia nearby sources. Default: True
plot_percentages True or False Write the target's flux percentages. Default: True
loc_legend best, upper left, etc Location of the legend (heatmap plot). Default: best
scale_factor Any number Scale factor for the stars. Default: 4000
scale_heatmap natural or log Scale of the heatmap color code. Default: natural
tpf_or_tesscut tpf or tesscut TPF or FFI tesscut. Default: tpf
cutout_size Number, Number Size of the FFI tesscut. Default: 11,11
img_fmt pdf, png, or pdfpng Format of output images. Default: pdfpng

[DILUTION] | Arguments for the DILUTION analysis

Parameter Possible values Description
td Any number Measured transit depth in the target's aperture
td_unit ppm, ppt, per, frac Unit of the measured transit depth
dilution_corr True or False The measured depth is corrected for dilution (e.g. SPOC). Default: True

Credits

If you use TESS-cont, please give credit to this work:

@ARTICLE{2024arXiv240918129C,
       author = {{Castro-Gonz{\'a}lez}, A. and {Lillo-Box}, J. and {Armstrong}, D.~J. and {Acu{\~n}a}, L. and {Aguichine}, A. and {Bourrier}, V. and {Gandhi}, S. and {Sousa}, S.~G. and {Delgado-Mena}, E. and {Moya}, A. and {Adibekyan}, V. and {Correia}, A.~C.~M. and {Barrado}, D. and {Damasso}, M. and {Winn}, J.~N. and {Santos}, N.~C. and {Barkaoui}, K. and {Barros}, S.~C.~C. and {Benkhaldoun}, Z. and {Bouchy}, F. and {Brice{\~n}o}, C. and {Caldwell}, D.~A. and {Collins}, K.~A. and {Essack}, Z. and {Ghachoui}, M. and {Gillon}, M. and {Hounsell}, R. and {Jehin}, E. and {Jenkins}, J.~M. and {Keniger}, M.~A.~F. and {Law}, N. and {Mann}, A.~W. and {Nielsen}, L.~D. and {Pozuelos}, F.~J. and {Schanche}, N. and {Seager}, S. and {Tan}, T. -G. and {Timmermans}, M. and {Villase{\~n}or}, J. and {Watkins}, C.~N. and {Ziegler}, C.},
        title = "{TOI-5005 b: A super-Neptune in the savanna near the ridge}",
      journal = {arXiv e-prints},
     keywords = {Astrophysics - Earth and Planetary Astrophysics},
         year = 2024,
        month = sep,
          eid = {arXiv:2409.18129},
        pages = {arXiv:2409.18129},
archivePrefix = {arXiv},
       eprint = {2409.18129},
 primaryClass = {astro-ph.EP},
       adsurl = {https://ui.adsabs.harvard.edu/abs/2024arXiv240918129C},
      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}

and add the following sentence within the acknowledgements section:

This work made use of \texttt{TESS-cont} (\url{https://github.com/castro-gzlz/TESS-cont}), which also made use of \texttt{tpfplotter} \citep{2020A&A...635A.128A} and \texttt{TESS-PRF} \citep{2022ascl.soft07008B}.

@ARTICLE{2020A&A...635A.128A,
       author = {{Aller}, A. and {Lillo-Box}, J. and {Jones}, D. and {Miranda}, L.~F. and {Barcel{\'o} Forteza}, S.},
        title = "{Planetary nebulae seen with TESS: Discovery of new binary central star candidates from Cycle 1}",
      journal = {\aap},
     keywords = {planetary nebulae: general, techniques: photometric, binaries: general, Astrophysics - Solar and Stellar Astrophysics},
         year = 2020,
        month = mar,
       volume = {635},
          eid = {A128},
        pages = {A128},
          doi = {10.1051/0004-6361/201937118},
archivePrefix = {arXiv},
       eprint = {1911.09991},
 primaryClass = {astro-ph.SR},
       adsurl = {https://ui.adsabs.harvard.edu/abs/2020A&A...635A.128A},
      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
@software{2022ascl.soft07008B,
       author = {{Bell}, Keaton J. and {Higgins}, Michael E.},
        title = "{TESS\_PRF: Display the TESS pixel response function}",
 howpublished = {Astrophysics Source Code Library, record ascl:2207.008},
         year = 2022,
        month = jul,
          eid = {ascl:2207.008},
       adsurl = {https://ui.adsabs.harvard.edu/abs/2022ascl.soft07008B},
      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}