metaWRAP v1.3

1. Database updates
2. New NCBI database support
3. Restored hybrid assembly functionality
4. Bug fixes in several modules

metaWRAP v1.2

1. Minor bug fixes throughout all modules
2. Improved performance through updated CONCOCT, Salmon, Samtools, and other key programs
3. Simplified installation requirements for fewer library conflicts

metaWRAP v1.1

1. Major and minor bug fixes across all modules
2. Incorporated user-submitted fixes and suggestions from the first four months since publicaiton
3. Major fixes in binning and bin_refinement modules

metaWRAP v1.0

1. Publication of metaWRAP in Microbiome
2. Official release of metaWRAP v=1.0
3. Major bug fixes in the Classify_bins module
4. Memory usage bug fixes
5. Minor misc. bug fixes in all modules

metaWRAP v0.9

1. Extensive bug fixes in all modules. Please consult the CHANGELOG for details.
2. Speed improvements to bin_refinement and reassemble_bins modules
3. Fixed conflicts with local perl5 libraries
4. Major rework of the read-splitting algorithm in reassemble_bins module for better speed, accuracy, and memory usage
5. Binning module now supports single-end reads as input

metaWRAP v0.8

1. MetaWRAP publication is now available at bioRxiv
2. Extensive bug fixes and feature improvements in all modules. Please consult the changelog for details.

metaWRAP v0.7

1. Fixed issues with Conda installation
2. Major bug fixes in Quant_bins and Classify_bins
3. Minor fixes and improved error handling throughout most modules
4. New module Annotate_bins - functionally annotate a set of bins

metaWRAP v0.6

Major updates:

1. Added metaWRAP and ALL dependencies to conda
2. MetaWRAP is now installed exclusively through conda
3. Significant speed improvements in the Reassemble_bins module
4. Major bug fixes in Krakem and Assembly modules

metaWRAP v0.5

Major updates:

1. Bug fixes and speed improvements in all modules
2. Improved speed of Binning_refiner by 4X through parallelization of refinement iterations
3. Added plotting functions to summarize success of reassemble_bins module
4. New module classify_bins - assigns taxonomy to bins using taxator-kt

metaWRAP v0.4

Major updates:

1. Most metaWRAP dependencies can now be installed from a Conda environment file
2. Bin_refiner now properly handles ambiguous contigs that end up in multiple bins
3. Added completion and contamination rank plots to compare metaWRAP bins to inputs
4. Major bug fixes throughout resulting from testing metaWRAP on multiple data sets