Upgrading R, bioconductor, dada2

Dockerfile

@@ -1,4 +1,4 @@
-FROM bioconductor/release_core2:20190418
+FROM bioconductor/bioconductor_docker:RELEASE_3_10
 
 LABEL org.label-schema.schema-version = "1.0.0-rc.1"
 
@@ -10,8 +10,8 @@ LABEL org.label-schema.url = "https://benjjneb.github.io/dada2/"
 LABEL maintainer="[email protected]"
 
 # this "version" label reflects the installed version of DADA2:
-LABEL org.label-schema.version = "1.10.1"
+LABEL org.label-schema.version = "1.14.0"
 
-RUN R -e 'BiocManager::install("dada2", version="3.8", update=TRUE, ask=FALSE)'
+RUN R -e 'BiocManager::install("dada2", version="3.10", update=TRUE, ask=FALSE)'
 
 CMD ["R"]

README.md

@@ -1,6 +1,6 @@
 # DADA2 Docker image
 
-[![](https://img.shields.io/badge/dada2-1.10.1-blue.svg)](https://hub.docker.com/r/blekhmanlab/dada2/ "Current DADA2 version is 1.10.1")[![](https://img.shields.io/docker/pulls/blekhmanlab/dada2.svg)](https://hub.docker.com/r/blekhmanlab/dada2/ "DADA2 image on Docker Hub")
+[![](https://img.shields.io/badge/dada2-1.14.0-blue.svg)](https://hub.docker.com/r/blekhmanlab/dada2/ "Current DADA2 version is 1.14.0")[![](https://img.shields.io/docker/pulls/blekhmanlab/dada2.svg)](https://hub.docker.com/r/blekhmanlab/dada2/ "DADA2 image on Docker Hub")
 
 A simplified, updated repository based on the [dada2docker](https://github.com/joey711/dada2docker) repo from Paul J. McMurdie.