Joss paper update. #217
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| # This workflow will install Python dependencies, run tests and lint with a single version of Python | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Python application | |
| on: | |
| push: | |
| branches: [ "main" ] | |
| pull_request: | |
| branches: [ "main" ] | |
| permissions: | |
| contents: read | |
| jobs: | |
| build: | |
| name: Build and test | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: | |
| - "3.9" | |
| - "3.10" | |
| - "3.11" | |
| - "3.12" | |
| os: | |
| - ubuntu-latest | |
| - macos-latest | |
| - windows-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up conda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| miniforge-variant: Mambaforge # mamba is faster than base conda | |
| miniforge-version: latest | |
| activate-environment: osier-env | |
| use-mamba: true | |
| use-only-tar-bz2: true | |
| - run: | | |
| conda config --env --set pip_interop_enabled True | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| - name: Install flake8 | |
| run: | | |
| python -m pip install flake8 | |
| - name: Install CBC | |
| if: matrix.os != 'windows-latest' | |
| run: | | |
| mamba install coin-or-cbc coincbc | |
| - name: install CBC (Windows) | |
| if: matrix.os == 'windows-latest' | |
| run: | | |
| curl -L https://github.com/coin-or/Cbc/releases/download/releases%2F2.10.10/Cbc-releases.2.10.10-w64-msvc17-md.zip -o cbc.zip | |
| unzip cbc.zip -d ${HOME}/cbc | |
| echo "${HOME}/cbc/bin" >> $GITHUB_PATH | |
| - name: Install osier package (macos) | |
| if: matrix.os == 'macos-latest' | |
| run: | | |
| pip install -e .'[doc]' | |
| - name: Install osier package | |
| if: matrix.os != 'macos-latest' | |
| run: | | |
| pip install -e .[doc] | |
| - name: Test with pytest | |
| run: | | |
| pytest tests/ | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Open Journals PDF Generator | |
| uses: openjournals/[email protected] |