Feedstock license: BSD-3-Clause
Home: http://tiledb.com
Package license: MIT
Summary: TileDB-SOMA API
Development: https://github.com/single-cell-data/TileDB-SOMA
Documentation: https://docs.tiledb.com/
Efficient storage and retrieval of single-cell data using TileDB
Home: http://tiledb.com
Package license: MIT
Summary: TileDB-SOMA C++ library
Development: https://github.com/single-cell-data/TileDB-SOMA
Documentation: https://docs.tiledb.com/
SOMA - for "Stack Of Matrices, Annotated" - is a flexible, extensible, and open-source API enabling access to data in a variety of formats. The driving use case of SOMA is for single-cell data in the form of annotated matrices where observations are frequently cells and features are genes, proteins, or genomic regions.
Home: http://tiledb.com
Package license: MIT
Summary: TileDB-SOMA R API
Development: https://github.com/single-cell-data/TileDB-SOMA/tree/main/apis/r
Documentation: https://docs.tiledb.com/
R API for efficient storage and retrieval of single-cell data using TileDB
Home: http://tiledb.com
Package license: MIT
Summary: TileDB-SOMA Python API
Development: https://github.com/single-cell-data/TileDB-SOMA/tree/main/apis/python
Documentation: https://docs.tiledb.com/
Python API for efficient storage and retrieval of single-cell data using TileDB
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Installing tiledbsoma from the tiledb channel can be achieved by adding tiledb to your channels with:
conda config --add channels tiledb
conda config --set channel_priority strict
Once the tiledb channel has been enabled, libtiledbsoma, r-tiledbsoma, tiledbsoma-py can be installed with conda:
conda install libtiledbsoma r-tiledbsoma tiledbsoma-py
or with mamba:
mamba install libtiledbsoma r-tiledbsoma tiledbsoma-py
It is possible to list all of the versions of libtiledbsoma available on your platform with conda:
conda search libtiledbsoma --channel tiledb
or with mamba:
mamba search libtiledbsoma --channel tiledb
Alternatively, mamba repoquery may provide more information:
# Search all versions available on your platform:
mamba repoquery search libtiledbsoma --channel tiledb
# List packages depending on `libtiledbsoma`:
mamba repoquery whoneeds libtiledbsoma --channel tiledb
# List dependencies of `libtiledbsoma`:
mamba repoquery depends libtiledbsoma --channel tiledb
If you would like to improve the tiledbsoma recipe or build a new
package version, please fork this repository and submit a PR. Upon submission,
your changes will be run on the appropriate platforms to give the reviewer an
opportunity to confirm that the changes result in a successful build. Once
merged, the recipe will be re-built and uploaded automatically to the
tiledb channel, whereupon the built conda packages will be available for
everybody to install and use from the tiledb channel.
Note that all branches in the TileDB-Inc/tiledbsoma-feedstock are
immediately built and any created packages are uploaded, so PRs should be based
on branches in forks and branches in the main repository should only be used to
build distinct package versions.
In order to produce a uniquely identifiable distribution:
- If the version of a package is not being increased, please add or increase
the
build/number. - If the version of a package is being increased, please remember to return
the
build/numberback to 0.