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HSdevmerge 240304 #140

Merged
merged 18 commits into from
Mar 11, 2024
Merged

HSdevmerge 240304 #140

merged 18 commits into from
Mar 11, 2024

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RevathiJambunathan
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RemiLehe and others added 18 commits February 29, 2024 01:30
* Update test that checks absorption of particles in PML

* Remove duplicated test file

* Update dimensions of data
Expand paths in `PATH` environment variable before
adding them and make them absolute paths.
Python builds require shared AMReX and WarpX libraries. To avoid
confusion with users that also build the executables, but do
not use the full installer logic, we recommend to use
two separate build directories, so the executables can use
a static build of their dependendencies to stay relocatable
(as in: can be copied without setting environment hints to
dependent shared libs).
How to do automatic pre-commit tests locally.
* AMReX: Weekly Update

* pyAMReX: Weekly Update
…WarpX#4689)

* use clang-tidy-15 instead of clang-tidy-14 for CI tests

* fix bug

* address issues found with clang-tidy-15

* address more issues found with clang-tidy

* address more issues found with clang-tidy

* address additional issues found with clang-tidy

* fix more issues found with clang-tidy

* fixed bugs

* fixed bugs

* fixed bugs

* fixed issue on Windows

* fixed bug

* address issues found with clang-tidy

* make std::string filepath const both for Windows and other OS

* make edge_lengths a const both with and without EB

* address more issues found with clang-tidy

* address issues found with clang-tidy

* address the residual issues found with clang-tidy

* addressed const-correctness issues

* fixed bug

* fixed bug

* address issue found with clang-tidy

* address issue found with clang-tidy
* Enable `WarpX::ComputeEdgeLengths` in RZ

* Update exit message when using EBs in RZ with fully electromagnetic solvers.
* enable the diagnostic of ParticleScraping in Python

* Update picmi.py

* Update picmi.py

* new test

* python update

* modification of the script

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update PICMI_inputs_rz.py

* json

* update

* Update PICMI_inputs_rz.py

* Update particle_boundary_interaction.json

* Update PICMI_inputs_rz.py

* Update PICMI_inputs_rz.py

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update PICMI_inputs_rz.py

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fix hanging script in parallel

* Make the test executable

* Update analysis script

* Update particle_containers.py

* Update PICMI_inputs_rz.py

* Update analysis.py

* Update analysis.py

* Update particle_containers.py

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Remi Lehe <[email protected]>
Co-authored-by: Axel Huebl <[email protected]>
* first draft

* adding normal only

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update ParticleBoundaryBuffer.cpp

* Update ParticleBoundaryBuffer.cpp

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
…#4740)

* add function to set domain boundary potentials from Python

* switch function arguments to form `potential_[lo/hi]_[x/y/z]` and add to docs
* move PoissonInterpCPtoFP to Interpolate.H

* concatenate nested namespaces
* split clang-tidy checks to improve performances

* rename folders and tests

* fix concurrency

* Simplify

---------

Co-authored-by: Axel Huebl <[email protected]>
* Replace links to learn git
* Bugfix in `fields.py` for GPU run without `cupy`

* apply suggestion from code review
* AMReX: 24.03

* pyAMReX: 24.03

* WarpX: 24.03
* Allow compilation with RZ EB

* Do not push cells for RZ Yee solver, when covered with EB

* Fix compilation errors

* Fix additional compilation errors

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fix additional compilation errors

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Add automated test

* Add automated test

* Fix path in tests

* Enable parser in RZ

* Update example script

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Clean-up PR

* Initialize EB quantities

* Modified EM field initialization in 2D with EB

* Typo fix

* Typo fix

* Ignoring unused variables correctly

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Correct condition for updating E

* Correct update of B

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update B push

* Update input script

* Revert "Update input script"

This reverts commit 5087485.

* Update initialization

* Updated test

* Move test to a different folder

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Add test for WarpX-test.ini

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fix path for tests

* Update test description

* Update test metadata

* Add checksum file

* Revert changes

* Revert changes

* Change lx to lr

* Revert "Change lx to lr"

This reverts commit be3039a.

* Change lx to lr

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: lgiacome <[email protected]>
@RevathiJambunathan RevathiJambunathan merged commit 61c83d6 into HarrisSheetinX Mar 11, 2024
38 of 58 checks passed
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7 participants