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1. deept2 deept2 Public

   DeepT2 utilizes deep learning techniques to identify type II polyketide (T2PK) synthases KSβ and their corresponding T2PK product within bacterial genomes. The method leverages ESM2 to transform KS…

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2. AMP-Modification AMP-Modification Public

   A pipeline for AMP antimicrobial activity modification. The pipeline is based on a genetic algorithm to generate and filter active peptides. The filter function includes property-based model and co…

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3. MultiT2 MultiT2 Public

   MultiT2 is an algorithm that connects disparate data from bacterial aromatic polyketides through multimodal learning. It specifically focuses on integrating protein sequences (CLFs) and chemical st…

   Jupyter Notebook