initial commit of alpha-version

.gitignore

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+*~
+build
+*.DS_Store
+.svn

CMakeLists.txt

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+cmake_minimum_required(VERSION 2.8.9)
+
+project(PETCPhantom)
+
+#-----------------------------------------------------------------------------
+# Extension meta-information
+set(EXTENSION_HOMEPAGE "http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/PETCPhantom")
+set(EXTENSION_CATEGORY "Quantification")
+set(EXTENSION_CONTRIBUTORS "Christian Bauer (University of Iowa), Ethan Ulrich (University of Iowa), Andrey Fedorov (SPL), Reinhard R. Beichel (University of Iowa), John Buatti (University of Iowa)")
+set(EXTENSION_DESCRIPTION "The PETCPhantom Extension allows measurement of calibration and uniformity in a cylinder phantom PET scan.")
+set(EXTENSION_ICONURL "https://raw.githubusercontent.com/QIICR/PETPhantomAnalysis/master/PETCPhantom.png")
+set(EXTENSION_SCREENSHOTURLS "")
+
+#-----------------------------------------------------------------------------
+# Extension dependencies
+find_package(Slicer REQUIRED)
+include(${Slicer_USE_FILE})
+
+#-----------------------------------------------------------------------------
+# Extension modules
+add_subdirectory(PETPhantomAnalysisCLI)
+add_subdirectory(PETPhantomAnalysis)
+
+#-----------------------------------------------------------------------------
+include(${Slicer_EXTENSION_CPACK})

License.txt

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+
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PETPhantomAnalysis/CMakeLists.txt

@@ -0,0 +1,33 @@
+cmake_minimum_required(VERSION 2.8.6)
+
+#-----------------------------------------------------------------------------
+set(MODULE_NAME PETPhantomAnalysis)
+
+#-----------------------------------------------------------------------------
+set(MODULE_PYTHON_SCRIPTS
+  PETPhantomAnalysis.py
+  )
+
+set(MODULE_PYTHON_RESOURCES
+  )
+
+#-----------------------------------------------------------------------------
+SlicerMacroBuildScriptedModule(
+  NAME PETPhantomAnalysis
+  SCRIPTS "${MODULE_PYTHON_SCRIPTS}"
+  RESOURCES "${MODULE_PYTHON_RESOURCES}"
+  )
+
+#-----------------------------------------------------------------------------
+if(BUILD_TESTING)
+
+  # Register the unittest subclass in the main script as a ctest.
+  # Note that the test will also be available at runtime.
+  slicer_add_python_unittest(SCRIPT ${MODULE_NAME}.py
+  SLICER_ARGS --additional-module-paths
+    ${CMAKE_BINARY_DIR}/${Slicer_QTSCRIPTEDMODULES_LIB_DIR}
+    ${DEPENDENCIES_ADDITIONAL_MODULE_PATHS})
+
+  #add_subdirectory(Testing)
+endif()
+