Interactive parameters selection and visualization of intermediate results for spot detection.
This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.
This package relies on spots3d, that details how to install the QI2lab fork of GPUfit, as well as CUDA dependencies. Once spots3d is installed, you can run:
pip install git+https://github.com/QI2lab/napari-spot-detection.git
Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.
Distributed under the terms of the GNU GPL v3.0 license, "napari-spot-detection" is free and open source software
If you encounter any problems, please file an issue along with a detailed description.