added fibre mapping and the functions ensuing it. #186
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| name: CemrgApp Tests and Code Coverage | |
| on: [push, pull_request] | |
| jobs: | |
| Test-n-Coverage: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - name: Download precompiled Build folder | |
| run: | | |
| wget -q -O Build.zip https://emckclac-my.sharepoint.com/:u:/g/personal/k2143219_kcl_ac_uk/ES5xxspvCyRGoHISDFTLifkBrcTmxNWCX4bzyUT_AkEnAg?download=1 | |
| 7z x Build.zip | |
| rm Build.zip | |
| sudo mv Build / | |
| - name: Download external libraries | |
| run: | | |
| wget -q -O Externals.zip https://emckclac-my.sharepoint.com/:u:/g/personal/k2143219_kcl_ac_uk/EX8zGabE-ctDoBnde6ntHR0Bx_1wYis_ql26aAzMoedMzg?download=1 | |
| 7z x Externals.zip | |
| rm Externals.zip | |
| sudo mv Externals / | |
| - name: Install missing packages | |
| run: | | |
| sudo apt update | |
| sudo DEBIAN_FRONTEND=noninteractive apt install doxygen graphviz libfreetype6-dev libglu1-mesa-dev libssl-dev libtiff5-dev libwrap0-dev libxcomposite1 libxcursor1 libxi-dev libxkbcommon-x11-0 libxt-dev mesa-common-dev libtbb2 -y | |
| sudo apt remove --auto-remove icu-devtools libicu-dev -y | |
| - name: Install Qt | |
| run: | | |
| sudo pip3 install --upgrade setuptools | |
| sudo pip3 install aqtinstall | |
| sudo aqt install --outputdir /Qt 5.12.10 linux desktop -m qtcharts qtnetworkauth qtpurchasing qtdatavis3d qtscript qtvirtualkeyboard qtwebengine qtwebglplugin | |
| - name: Clone MITK | |
| run: sudo git clone --branch v2022.10 https://phabricator.mitk.org/source/mitk.git /MITK | |
| - name: Disable tests for CppMicroServices | |
| run: sudo sed -i 's/set(US_BUILD_TESTING ON)/set(US_BUILD_TESTING OFF)/' /MITK/Modules/CMakeLists.txt | |
| - name: Change timestamps of the MITK directory | |
| run: sudo find /MITK/ -exec touch -a -m -d 20210401 {} \; | |
| - name: Clone CemrgApp | |
| uses: actions/checkout@v4 | |
| with: | |
| path: CemrgApp | |
| - name: Move CemrgApp to root | |
| run: sudo mv CemrgApp / | |
| - name: Build | |
| working-directory: /Build | |
| env: | |
| CC: gcc | |
| CXX: g++ | |
| run: make -j4 | |
| - name: Test | |
| working-directory: /Build/MITK-build | |
| env: | |
| QT_PLUGIN_PATH: /Qt/5.12.10/gcc_64/plugins | |
| QT_QPA_PLATFORM: minimal | |
| run: ctest -R Cemrg -C Debug -V | |
| - name: Code Coverage | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| root_dir: /CemrgApp/ | |
| directory: ${{ github.workspace }} | |
| plugin: gcov |