Introduction

A repository for exploring computational neuroscience~

Study happy~

Contents

Datasets

Allensdk neuropixels dataset The Visual Coding – Neuropixels project uses high-density extracellular electrophysiology (Ecephys) probes to record spikes from a wide variety of regions in the mouse brain.

Courses

Neuromatch computational neuroscience Welcome to the Neuromatch computational neuroscience course!

Neuromatch deep learning Welcome to the Neuromatch deep learning course!

Toturials

ggyang multitasks Tutorial codes for modeling brains with neural nets

Pillowlab_GLM Tutorial on Gaussian and Poisson generalized linear models (GLMs) for spike train data

Interesting Research

gyyang nn-brain Code for Task representations in neural networks trained to perform many cognitive tasks

byon_yu communication-subspace Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)

byon_yu correlation-maps Code for "Feedforward and feedback interactions between visual cortical areas use different population activity patterns", Semedo et al. (Nature Communications, 2022)

pillow_2017_mtlipGLM Code for "Functional dissection of signal and noise in MT and LIP during decision-making (2017 pillow Nat.Neuro)"

Model Learning Practice

GLM_allen_learn Try to use GLM to analysis Allendata, which refer to this tutorial

CCA_allen_learn Try to use CCA to analysis Allendata, which refer to this blog and this tutorial