run-github-workflows #117
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| name: run-github-workflows | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| workflow_dispatch: | |
| jobs: | |
| solve-environments-and-upload-files: | |
| name: run tcy, create environment, and export environment files | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest,windows-latest] | |
| runs-on: ${{ matrix.os }} | |
| permissions: | |
| contents: write | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| steps: | |
| - name: checkout repository | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ github.head_ref }} | |
| - name: setup python in order to run tcy.py | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.11 | |
| - name: install python dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install pandas | |
| python -m pip install pytest | |
| - name: run tcy.py to create a .yml file for Linux (will be skipped for windows-latest runner) | |
| if: runner.os == 'Linux' | |
| run: python tcy.py linux --yml_name=${{ matrix.os }} --yml_dir=./environments --yml_file_name=${{ matrix.os }}.yml --tsv_path=./environments/packages.tsv --necessity=required | |
| - name: run tcy.py to create a .yml file for Windows (will be skipped for ubuntu-latest runner) | |
| if: runner.os == 'Windows' | |
| run: python tcy.py windows --yml_name=${{ matrix.os }} --yml_dir=./environments --yml_file_name=${{ matrix.os }}.yml --tsv_path=./environments/packages.tsv --necessity=required | |
| - name: setup micromamba and create environment using .yml file | |
| id: createEnvironment | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: ./environments/${{ matrix.os }}.yml | |
| environment-name: ${{ matrix.os }} | |
| - name: initialize conda for Git Bash (will be skipped for linux runner) | |
| if: runner.os == 'Windows' | |
| run: echo ". /c/Miniconda/etc/profile.d/conda.sh" >> ~/.bash_profile | |
| - name: export conda environment as .yml file and as spec-file.txt and export pip-packages as .txt file | |
| run: | | |
| conda env export -p "${MAMBA_ROOT_PREFIX}/envs/${{ matrix.os }}" | grep -v "^prefix: " | sed -E 's/^name:.*(ubuntu-latest|windows-latest)/name: \1/' > ./environments/${{ matrix.os }}_solved.yml | |
| conda list -p "${MAMBA_ROOT_PREFIX}/envs/${{ matrix.os }}" --explicit > ./environments/${{ matrix.os }}_solved.txt | |
| pip freeze | grep -v "@ file" > ./environments/${{ matrix.os }}_solved_pip-requirements.txt | |
| - name: upload exported files as artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: ${{ matrix.os }} | |
| path: | | |
| ./environments/${{ matrix.os }}.yml | |
| ./environments/${{ matrix.os }}_solved.yml | |
| ./environments/${{ matrix.os }}_solved.txt | |
| ./environments/${{ matrix.os }}_solved_pip-requirements.txt | |
| download-artifacts-and-push: | |
| name: download all files that where created by the runners and push them to repo (but only if something has changed) | |
| if: ${{ always() }} | |
| needs: solve-environments-and-upload-files | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: checkout repository | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ github.head_ref }} | |
| - name: download all files that were created using different operating systems | |
| uses: actions/download-artifact@v4 | |
| with: | |
| path: ./environments | |
| - name: add and commit files (but only if something has changed) | |
| uses: stefanzweifel/git-auto-commit-action@v5 |