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FynnBe · Nov 14, 2023 · 17a5ba5 · 17a5ba5
1 parent 513b0d5
commit 17a5ba5
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Showing 146 changed files with 1,725 additions and 1,748 deletions.
diff --git a/rdfs/10.5281/zenodo.5749843/5877226/test_summary.yaml b/rdfs/10.5281/zenodo.5749843/5877226/test_summary.yaml
@@ -1,10 +1,10 @@
 bioimageio_core_version: 0.5.9
-bioimageio_spec_version: 0.4.9.post4
+bioimageio_spec_version: 0.4.9.post5
 rdf_sha256: a3e7157a11bd1fc3f6784ac6303534dce39bae2e620cedd3bf83f7e071928c81
 status: failed
 tests:
   bioimageio:
-  - bioimageio_spec_version: 0.4.9post4
+  - bioimageio_spec_version: 0.4.9post5
     error: null
     name: bioimageio.spec static validation of model RDF 0.4.9 with update to latest
       format version
@@ -15,7 +15,7 @@ tests:
         [''semantic-segmentation'', ''instance-segmentation'', ''object-detection'',
         ''image-classification'', ''denoising'', ''image-restoration'', ''image-reconstruction'',
         ''in-silico-labeling'']}]'}
-  - bioimageio_spec_version: 0.4.9post4
+  - bioimageio_spec_version: 0.4.9post5
     error: null
     name: bioimageio.spec static validation of model RDF 0.4.9
     nested_errors: {}
@@ -26,9 +26,9 @@ tests:
         ''image-classification'', ''denoising'', ''image-restoration'', ''image-reconstruction'',
         ''in-silico-labeling'']}]'}
   - bioimageio_core_version: 0.5.9
-    bioimageio_spec_version: 0.4.9post4
-    error: 'Failed to download https://zenodo.org/api/files/3759664b-38bf-4ba8-b61d-b017dcf420d1/resultImage.tif
-      (403 Client Error: FORBIDDEN for url: https://zenodo.org/api/files/3759664b-38bf-4ba8-b61d-b017dcf420d1/resultImage.tif)'
+    bioimageio_spec_version: 0.4.9post5
+    error: 'Failed to download https://zenodo.org/api/files/3759664b-38bf-4ba8-b61d-b017dcf420d1/exampleImage.tif
+      (503 Server Error: Service Unavailable for url: https://zenodo.org/api/files/3759664b-38bf-4ba8-b61d-b017dcf420d1/exampleImage.tif)'
     name: load resource description
     nested_errors: null
     status: failed
@@ -66,72 +66,83 @@ tests:
       "  File \"/home/runner/micromamba/envs/5877226/lib/python3.7/site-packages/bioimageio/spec/shared/_resolve_source.py\",
         line 235, in _resolve_source_uri_node\n    local_path = _download_url(path_or_remote_uri,
         output, pbar=pbar)\n", "  File \"/home/runner/micromamba/envs/5877226/lib/python3.7/site-packages/bioimageio/spec/shared/_resolve_source.py\",
-        line 485, in _download_url\n    raise RuntimeError(f\"Failed to download {uri}
+        line 490, in _download_url\n    raise RuntimeError(f\"Failed to download {uri}
         ({e})\") from e\n"]
     warnings: {}
   deepimagej:
   - {bioimageio_spec_version: 0.4.8post1, name: Reproduce test outputs with DeepImageJ
       headless, status: passed}
   ilastik:
-  - bioimageio_core_version: 0.5.7
-    bioimageio_spec_version: 0.4.8
+  - bioimageio_core_version: 0.5.8
+    bioimageio_spec_version: 0.4.9
     error: null
     name: load resource description
+    nested_errors: null
     status: passed
     traceback: null
     warnings: {}
   - {error: null, name: has expected resource type, status: passed, traceback: null}
-  - bioimageio_core_version: 0.5.7
-    bioimageio_spec_version: 0.4.8
+  - bioimageio_core_version: 0.5.8
+    bioimageio_spec_version: 0.4.9
     error: null
     name: All URLs and paths available
     nested_errors: null
     status: passed
     traceback: null
     warnings: {}
-  - bioimageio_core_version: 0.5.7
-    bioimageio_spec_version: 0.4.8
+  - bioimageio_core_version: 0.5.8
+    bioimageio_spec_version: 0.4.9
     error: null
     name: Test documentation completeness.
     status: passed
     traceback: null
     warnings: {documentation: No '# Validation' (sub)section found.}
-  - bioimageio_core_version: 0.5.7
-    bioimageio_spec_version: 0.4.8
+  - bioimageio_core_version: 0.5.8
+    bioimageio_spec_version: 0.4.9
     error: null
     name: reproduce test outputs from test inputs
     status: passed
     traceback: null
     warnings:
-      non-validation-warnings: ['Model tensorflow version (1, 15) does not match 1.14.0.The
-          prediction results may be wrong', 'Device management is not implemented
-          for keras yet, cannot unload model', Computed dataset percentiles naively
-          by averaging percentiles of samples.]
-  - bioimageio_core_version: 0.5.8
-    bioimageio_spec_version: 0.4.9
+      non-validation-warnings: ['Device management is not implemented for keras yet,
+          cannot unload model', Computed dataset percentiles naively by averaging
+          percentiles of samples., 'Model tensorflow version (1, 15) does not match
+          1.14.0.The prediction results may be wrong']
+  - bioimageio_core_version: 0.5.7
+    bioimageio_spec_version: 0.4.8
     error: null
     name: load resource description
-    nested_errors: null
     status: passed
     traceback: null
     warnings: {}
-  - bioimageio_core_version: 0.5.8
-    bioimageio_spec_version: 0.4.9
+  - bioimageio_core_version: 0.5.7
+    bioimageio_spec_version: 0.4.8
     error: null
     name: All URLs and paths available
     nested_errors: null
     status: passed
     traceback: null
     warnings: {}
-  - bioimageio_core_version: 0.5.8
-    bioimageio_spec_version: 0.4.9
+  - bioimageio_core_version: 0.5.7
+    bioimageio_spec_version: 0.4.8
     error: null
     name: Test documentation completeness.
     status: passed
     traceback: null
     warnings: {documentation: No '# Validation' (sub)section found.}
-  - bioimageio_core_version: 0.5.8
-    bioimageio_spec_version: 0.4.9
+  - bioimageio_core_version: 0.5.7
+    bioimageio_spec_version: 0.4.8
+    error: null
+    name: reproduce test outputs from test inputs
+    status: passed
+    traceback: null
+    warnings:
+      non-validation-warnings: ['Model tensorflow version (1, 15) does not match 1.14.0.The
+          prediction results may be wrong', 'Device management is not implemented
+          for keras yet, cannot unload model', Computed dataset percentiles naively
+          by averaging percentiles of samples.]
+  - bioimageio_core_version: 0.5.7
+    bioimageio_spec_version: 0.4.8
     error: '''str'' object has no attribute ''decode'''
     name: reproduce test outputs from test inputs
     status: failed
@@ -150,8 +161,8 @@ tests:
     warnings:
       non-validation-warnings: ['Model tensorflow version (1, 15) does not match 1.14.0.The
           prediction results may be wrong']
-  - bioimageio_core_version: 0.5.7
-    bioimageio_spec_version: 0.4.8
+  - bioimageio_core_version: 0.5.8
+    bioimageio_spec_version: 0.4.9
     error: '''str'' object has no attribute ''decode'''
     name: reproduce test outputs from test inputs
     status: failed
@@ -170,14 +181,3 @@ tests:
     warnings:
       non-validation-warnings: ['Model tensorflow version (1, 15) does not match 1.14.0.The
           prediction results may be wrong']
-  - bioimageio_core_version: 0.5.8
-    bioimageio_spec_version: 0.4.9
-    error: null
-    name: reproduce test outputs from test inputs
-    status: passed
-    traceback: null
-    warnings:
-      non-validation-warnings: ['Device management is not implemented for keras yet,
-          cannot unload model', Computed dataset percentiles naively by averaging
-          percentiles of samples., 'Model tensorflow version (1, 15) does not match
-          1.14.0.The prediction results may be wrong']