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Handle and log errors when ingesting bioschemas content #936

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fbacall merged 1 commit into master from bioschemas-exception-handling

Mar 19, 2024

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fbacall commented Mar 11, 2024

Summary of changes

Catches and logs exceptions that occur when scraping Bioschemas sources.
Fixes awkward formatting of error messages when markdown is rendered.

Motivation and context

A user was trying to test a Bioschemas source, and a single page with a JSON error caused the entire ingestion to fail with a generic error message.

Checklist

I have read and followed the CONTRIBUTING guide.
I confirm that I have the authority necessary to make this contribution on behalf of its copyright owner and agree
to license it to the TeSS codebase under the
BSD license.


          Handle and log errors when ingesting bioschemas content

b1ed5fe

fbacall merged commit 08b87e5 into master

11 checks passed

fbacall deleted the bioschemas-exception-handling branch

March 19, 2024 10:54

fbacall mentioned this pull request

Source testing job is fragile #935

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