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@BGSU-RNA

BGSU RNA Bioinformatics

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  1. fr3d-python fr3d-python Public

    Python implementation of the FR3D software for searching and annotating RNA 3D structures

    Python 17 10

  2. FR3D FR3D Public

    The official repository for "Find RNA 3D" (FR3D), a suite of programs for searching RNA 3D structures.

    MATLAB 10 6

  3. RNA-Structure-utils RNA-Structure-utils Public

    Some utilities for dealing with RNA structure

    Python 7 2

  4. RNA-3D-Hub-core RNA-3D-Hub-core Public

    New resources for RNA Structural Bioinformatics: RNA 3D Motif Atlas, RNA Non-redundant Lists, RNA Structure Atlas (motif extraction and classification, database management)

    Python 6 1

  5. JAR3D JAR3D Public

    Java-based Alignment of RNA using 3D structure

    MATLAB 5 2

  6. RNA-3D-Hub RNA-3D-Hub Public

    Resources for RNA Structural Bioinformatics: RNA 3D Motif Atlas, RNA Non-redundant Lists, RNA Structure Atlas

    JavaScript 3 1

Repositories

Showing 10 of 23 repositories
  • fr3d-python Public

    Python implementation of the FR3D software for searching and annotating RNA 3D structures

    BGSU-RNA/fr3d-python’s past year of commit activity
    Python 17 10 7 5 Updated Nov 26, 2024
  • RNA-3D-correspondence Public

    Web application for comparing and visualising RNA 3D motifs across many 3D structures

    BGSU-RNA/RNA-3D-correspondence’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Nov 26, 2024
  • RNA-3D-Hub-core Public

    New resources for RNA Structural Bioinformatics: RNA 3D Motif Atlas, RNA Non-redundant Lists, RNA Structure Atlas (motif extraction and classification, database management)

    BGSU-RNA/RNA-3D-Hub-core’s past year of commit activity
    Python 6 1 1 4 Updated Nov 20, 2024
  • RNA-3D-Hub Public

    Resources for RNA Structural Bioinformatics: RNA 3D Motif Atlas, RNA Non-redundant Lists, RNA Structure Atlas

    BGSU-RNA/RNA-3D-Hub’s past year of commit activity
    JavaScript 3 1 4 0 Updated Nov 13, 2024
  • JAR3D-Website Public

    JAR3D webserver for matching RNA loop sequences with RNA 3D motifs

    BGSU-RNA/JAR3D-Website’s past year of commit activity
    JavaScript 1 1 6 0 Updated Nov 1, 2024
  • JAR3D Public

    Java-based Alignment of RNA using 3D structure

    BGSU-RNA/JAR3D’s past year of commit activity
    MATLAB 5 2 6 2 Updated Oct 4, 2024
  • FR3D Public

    The official repository for "Find RNA 3D" (FR3D), a suite of programs for searching RNA 3D structures.

    BGSU-RNA/FR3D’s past year of commit activity
    MATLAB 10 6 4 0 Updated Oct 3, 2024
  • RNA-Structure-utils Public

    Some utilities for dealing with RNA structure

    BGSU-RNA/RNA-Structure-utils’s past year of commit activity
    Python 7 2 3 0 Updated Oct 1, 2024
  • WebFR3D Public

    Web application for searching RNA 3D structures.

    BGSU-RNA/WebFR3D’s past year of commit activity
    JavaScript 1 1 8 0 Updated Apr 24, 2024
  • WebR3DAlign Public

    Web application for locally optimized, nucleotide to nucleotide pairwise alignments of RNA 3D structures

    BGSU-RNA/WebR3DAlign’s past year of commit activity
    HTML 1 1 8 0 Updated Apr 20, 2023
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