requirements.txt

asttokens==2.4.1
backcall==0.2.0
biopython==1.83
certifi==2024.7.4
charset-normalizer==3.3.2
comm==0.2.1
contourpy==1.1.1
cycler==0.12.1
debugpy==1.8.1
decorator==5.1.1
et-xmlfile==1.1.0
executing==2.0.1
fair-esm==2.0.0
filelock==3.13.1
fonttools==4.49.0
fsspec==2024.2.0
huggingface-hub==0.24.5
idna==3.7
importlib-metadata==7.0.1
importlib-resources==6.1.2
ipykernel==6.29.3
ipython==8.12.3
jedi==0.19.1
Jinja2==3.1.3
joblib==1.4.2
jupyter-client==8.6.0
jupyter-core==5.7.1
kiwisolver==1.4.5
llvmlite==0.41.1
lmdb==1.5.1
MarkupSafe==2.1.5
matplotlib==3.7.5
matplotlib-inline==0.1.6
mpmath==1.3.0
nest-asyncio==1.6.0
networkx==3.1
numba==0.58.1
numpy==1.24.4
nvidia-cublas-cu12==12.1.3.1
nvidia-cuda-cupti-cu12==12.1.105
nvidia-cuda-nvrtc-cu12==12.1.105
nvidia-cuda-runtime-cu12==12.1.105
nvidia-cudnn-cu12==8.9.2.26
nvidia-cufft-cu12==11.0.2.54
nvidia-curand-cu12==10.3.2.106
nvidia-cusolver-cu12==11.4.5.107
nvidia-cusparse-cu12==12.1.0.106
nvidia-nccl-cu12==2.19.3
nvidia-nvjitlink-cu12==12.4.99
nvidia-nvtx-cu12==12.1.105
openpyxl==3.1.2
packaging==23.2
pandas==2.0.3
parso==0.8.3
patsy==0.5.6
pexpect==4.9.0
pickleshare==0.7.5
pillow==10.2.0
platformdirs==4.2.0
prompt-toolkit==3.0.43
psutil==5.9.8
ptyprocess==0.7.0
pure-eval==0.2.2
pygments==2.17.2
pynndescent==0.5.13
pyparsing==3.1.2
python-dateutil==2.9.0.post0
pytz==2024.1
PyYAML==6.0.2
pyzmq==25.1.2
regex==2024.7.24
requests==2.32.3
safetensors==0.4.4
scikit-learn==1.3.2
scipy==1.10.1
seaborn==0.13.2
six==1.16.0
stack-data==0.6.3
statsmodels==0.14.1
sympy==1.12
threadpoolctl==3.5.0
tokenizers==0.19.1
torch==2.2.1
torchaudio==2.2.1
torchinterp1d==1.1
torchvision==0.17.1
tornado==6.4
tqdm==4.66.4
traitlets==5.14.1
transformers==4.44.0
triton==2.2.0
typing-extensions==4.10.0
tzdata==2024.1
umap-learn==0.5.6
urllib3==2.2.2
wcwidth==0.2.13
zipp==3.17.0