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environment.yml
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environment.yml
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# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
_libgcc_mutex=0.1=conda_forge
_openmp_mutex=4.5=2_gnu
asttokens=2.4.0=pyhd8ed1ab_0
backcall=0.2.0=pyh9f0ad1d_0
backports=1.0=pyhd8ed1ab_3
backports.functools_lru_cache=1.6.5=pyhd8ed1ab_0
biopython=1.81=py38h01eb140_1
brotli=1.1.0=hd590300_1
brotli-bin=1.1.0=hd590300_1
brotli-python=1.1.0=py38h17151c0_1
bzip2=1.0.8=h7f98852_4
ca-certificates=2023.7.22=hbcca054_0
certifi=2023.7.22=pyhd8ed1ab_0
charset-normalizer=3.2.0=pyhd8ed1ab_0
comm=0.1.4=pyhd8ed1ab_0
contourpy=1.1.1=py38h7f3f72f_1
cycler=0.11.0=pyhd8ed1ab_0
debugpy=1.8.0=py38h17151c0_1
decorator=5.1.1=pyhd8ed1ab_0
et-xmlfile=1.1.0=pypi_0
executing=1.2.0=pyhd8ed1ab_0
filelock=3.9.0=pypi_0
flexbar=3.5.0=hf92b6da_10
fonttools=4.43.0=py38h01eb140_0
freetype=2.12.1=h267a509_2
fsspec=2023.4.0=pypi_0
icu=73.2=h59595ed_0
idna=3.4=pyhd8ed1ab_0
importlib-metadata=6.8.0=pyha770c72_0
importlib-resources=6.1.0=pyhd8ed1ab_0
importlib_metadata=6.8.0=hd8ed1ab_0
importlib_resources=6.1.0=pyhd8ed1ab_0
ipykernel=6.25.2=pyh2140261_0
ipython=8.12.0=pyh41d4057_0
jedi=0.19.1=pyhd8ed1ab_0
jinja2=3.1.2=pypi_0
joblib=1.3.2=pypi_0
jupyter_client=8.3.1=pyhd8ed1ab_0
jupyter_core=5.3.2=py38h578d9bd_0
kiwisolver=1.4.5=py38h7f3f72f_1
lcms2=2.15=hb7c19ff_3
ld_impl_linux-64=2.40=h41732ed_0
lerc=4.0.0=h27087fc_0
libblas=3.9.0=18_linux64_openblas
libbrotlicommon=1.1.0=hd590300_1
libbrotlidec=1.1.0=hd590300_1
libbrotlienc=1.1.0=hd590300_1
libcblas=3.9.0=18_linux64_openblas
libdeflate=1.19=hd590300_0
libffi=3.4.2=h7f98852_5
libgcc-ng=13.2.0=h807b86a_2
libgfortran-ng=13.2.0=h69a702a_2
libgfortran5=13.2.0=ha4646dd_2
libgomp=13.2.0=h807b86a_2
libhwloc=2.9.3=default_h554bfaf_1009
libiconv=1.17=h166bdaf_0
libjpeg-turbo=3.0.0=hd590300_1
liblapack=3.9.0=18_linux64_openblas
libnsl=2.0.0=hd590300_1
libopenblas=0.3.24=pthreads_h413a1c8_0
libpng=1.6.39=h753d276_0
libsodium=1.0.18=h36c2ea0_1
libsqlite=3.43.0=h2797004_0
libstdcxx-ng=13.2.0=h7e041cc_2
libtiff=4.6.0=ha9c0a0a_2
libuuid=2.38.1=h0b41bf4_0
libwebp-base=1.3.2=hd590300_0
libxcb=1.15=h0b41bf4_0
libxml2=2.11.5=h232c23b_1
libzlib=1.2.13=hd590300_5
markupsafe=2.1.2=pypi_0
matplotlib-base=3.7.3=py38h58ed7fa_0
matplotlib-inline=0.1.6=pyhd8ed1ab_0
matplotlib-venn=0.11.9=pypi_0
mpmath=1.3.0=pypi_0
munkres=1.1.4=pyh9f0ad1d_0
ncurses=6.4=hcb278e6_0
nest-asyncio=1.5.6=pyhd8ed1ab_0
networkx=3.0=pypi_0
numpy=1.24.4=py38h59b608b_0
openjpeg=2.5.0=h488ebb8_3
openpyxl=3.1.2=pypi_0
openssl=3.1.4=hd590300_0
packaging=23.2=pyhd8ed1ab_0
pandas=2.0.3=py38h01efb38_1
parso=0.8.3=pyhd8ed1ab_0
patsy=0.5.3=pyhd8ed1ab_0
pexpect=4.8.0=pyh1a96a4e_2
pickleshare=0.7.5=py_1003
pillow=10.0.1=py38ha43c96d_2
pip=23.2.1=pyhd8ed1ab_0
platformdirs=3.11.0=pyhd8ed1ab_0
pooch=1.7.0=pyhd8ed1ab_4
prompt-toolkit=3.0.39=pyha770c72_0
prompt_toolkit=3.0.39=hd8ed1ab_0
psutil=5.9.5=py38h01eb140_1
pthread-stubs=0.4=h36c2ea0_1001
ptyprocess=0.7.0=pyhd3deb0d_0
pure_eval=0.2.2=pyhd8ed1ab_0
pygments=2.16.1=pyhd8ed1ab_0
pyparsing=3.1.1=pyhd8ed1ab_0
pysocks=1.7.1=pyha2e5f31_6
python=3.8.17=he550d4f_0_cpython
python-dateutil=2.8.2=pyhd8ed1ab_0
python-tzdata=2023.3=pyhd8ed1ab_0
python_abi=3.8=4_cp38
pytz=2023.3.post1=pyhd8ed1ab_0
pyzmq=25.1.1=py38h509eb50_1
readline=8.2=h8228510_1
requests=2.31.0=pyhd8ed1ab_0
scikit-learn=1.2.0=pypi_0
scipy=1.10.1=py38h59b608b_3
seaborn=0.13.0=hd8ed1ab_0
seaborn-base=0.13.0=pyhd8ed1ab_0
seqan-library=2.4.0=0
seqkit=2.5.1=h9ee0642_0
setuptools=68.2.2=pyhd8ed1ab_0
six=1.16.0=pyh6c4a22f_0
stack_data=0.6.2=pyhd8ed1ab_0
statsmodels=0.14.0=py38h31356c5_1
sympy=1.12=pypi_0
tbb=2021.10.0=h00ab1b0_2
threadpoolctl=3.2.0=pypi_0
tk=8.6.13=h2797004_0
torch=2.1.0+cpu=pypi_0
torchaudio=2.1.0+cpu=pypi_0
torchvision=0.16.0+cpu=pypi_0
tornado=6.3.3=py38h01eb140_1
traitlets=5.10.1=pyhd8ed1ab_0
typing-extensions=4.8.0=hd8ed1ab_0
typing_extensions=4.8.0=pyha770c72_0
unicodedata2=15.1.0=py38h01eb140_0
urllib3=2.0.5=pyhd8ed1ab_0
wcwidth=0.2.8=pyhd8ed1ab_0
wheel=0.41.2=pyhd8ed1ab_0
xgboost=2.0.0=pypi_0
xorg-libxau=1.0.11=hd590300_0
xorg-libxdmcp=1.1.3=h7f98852_0
xz=5.2.6=h166bdaf_0
zeromq=4.3.4=h9c3ff4c_1
zipp=3.17.0=pyhd8ed1ab_0
zlib=1.2.13=hd590300_5
zstd=1.5.5=hfc55251_0